Single-Molecule FRET Reveals the Folding Dynamics of the Human Telomerase RNA Pseudoknot Domain

被引:48
|
作者
Hengesbach, Martin [1 ]
Kim, Nak-Kyoon [3 ]
Feigon, Juli [2 ]
Stone, Michael D. [1 ]
机构
[1] Univ Calif Santa Cruz, Ctr Mol Biol RNA, Dept Chem & Biochem, Santa Cruz, CA 95064 USA
[2] Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
[3] Korea Inst Sci & Technol, Adv Anal Ctr, Seoul, South Korea
关键词
FRET; NMR spectroscopy; RNA structures; single-molecule studies; DYSKERATOSIS-CONGENITA; TRIPLE-HELIX; IN-VITRO;
D O I
10.1002/anie.201200526
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Do knot FRET: Single-molecule FRET was used to analyze the folding of human telomerase RNA (see scheme) and allowed discrimination between the correctly folded(left) and misfolded(right) structures. Analyzing the effects of various mutations showed that base pairing, triplex formation, and Mg 2+ ion binding act synergistically in the folding of the pseudoknot structure in a functional hTR construct. Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
引用
收藏
页码:5876 / 5879
页数:4
相关论文
共 50 条
  • [41] Site-Specific Labelling of Native Mammalian Proteins for Single-Molecule FRET Measurements
    Gust, Alexander
    Jakob, Leonhard
    Zeitler, Daniela M.
    Bruckmann, Astrid
    Kramm, Kevin
    Willkomm, Sarah
    Tinnefeld, Philip
    Meister, Gunter
    Grohmann, Dina
    CHEMBIOCHEM, 2018, 19 (08) : 780 - 783
  • [42] Improved Temporal Resolution and Linked Hidden Markov Modeling for Switchable Single-Molecule FRET
    Uphoff, Stephan
    Gryte, Kristofer
    Evans, Geraint
    Kapanidis, Achillefs N.
    CHEMPHYSCHEM, 2011, 12 (03) : 571 - 579
  • [43] Single-Molecule FRET Imaging for Enzymatic Reactions at High Ligand Concentrations
    Sugawa, Mitsuhiro
    Nishikawa, So
    Iwane, Atsuko Hikikoshi
    Biju, Vasudevanpillai
    Yanagida, Toshio
    SMALL, 2010, 6 (03) : 346 - 350
  • [44] High Precision FRET at Single-molecule Level for Biomolecule Structure Determination
    Ma, Junyan
    Yanez-Orozco, Inna S.
    Adariani, Soheila Rezaei
    Dolino, Drew
    Jayaraman, Vasanthi
    Sanabria, Hugo
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2017, (123):
  • [45] Encoding Multiple Virtual Signals in DNA Barcodes with Single-Molecule FRET
    Kim, Sung Hyun
    Kim, Hyunwoo
    Jeong, Hawoong
    Yoon, Tae-Young
    NANO LETTERS, 2021, 21 (04) : 1694 - 1701
  • [46] Single-molecule analysis reveals that a glucagon-bound extracellular domain of the glucagon receptor is dynamic
    Liu, Ting
    Khanal, Susmita
    Hertslet, Gillian D.
    Lamichhane, Rajan
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2023, 299 (09)
  • [47] Single-Molecule Photoactivation FRET: A General and Easy-To-Implement Approach To Break the Concentration Barrier
    Peng, Sijia
    Sun, Ruirui
    Wang, Wenjuan
    Chen, Chunlai
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2017, 56 (24) : 6882 - 6885
  • [48] Bioorthogonal Chemistry Enables Single-Molecule FRET Measurements of Catalytically Active Protein Disulfide Isomerase
    Chinnaraj, Mathivanan
    Barrios, David A.
    Frieden, Carl
    Heyduk, Tomasz
    Flaumenhaft, Robert
    Pozzi, Nicola
    CHEMBIOCHEM, 2021, 22 (01) : 134 - 138
  • [49] Watching conformational dynamics of ABC transporters with single-molecule tools
    Husada, Florence
    Gouridis, Giorgos
    Vietrov, Ruslan
    Schuurman-Wolters, Gea K.
    Ploetz, Evelyn
    de Boer, Marijn
    Poolman, Bert
    Cordes, Thorben
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2015, 43 : 1041 - 1047
  • [50] Single-Molecule Fluorescence Studies of Nucleosome Dynamics
    Gurunathan, K.
    Levitus, M.
    CURRENT PHARMACEUTICAL BIOTECHNOLOGY, 2009, 10 (05) : 559 - 568