An interpretable mortality prediction model for COVID-19 patients

被引:583
作者
Yan, Li [1 ]
Zhang, Hai-Tao [2 ]
Goncalves, Jorge [3 ,4 ]
Xiao, Yang [2 ]
Wang, Maolin [2 ]
Guo, Yuqi [2 ]
Sun, Chuan [2 ]
Tang, Xiuchuan [5 ]
Jing, Liang [1 ]
Zhang, Mingyang [2 ]
Huang, Xiang [2 ]
Xiao, Ying [2 ]
Cao, Haosen [2 ]
Chen, Yanyan [6 ]
Ren, Tongxin [7 ]
Wang, Fang [1 ]
Xiao, Yaru [1 ]
Huang, Sufang [1 ]
Tan, Xi [8 ]
Huang, Niannian [8 ]
Jiao, Bo [8 ]
Cheng, Cheng [2 ]
Zhang, Yong [9 ]
Luo, Ailin [8 ]
Mombaerts, Laurent [3 ]
Jin, Junyang [7 ]
Cao, Zhiguo [2 ]
Li, Shusheng [1 ]
Xu, Hui [8 ]
Yuan, Ye [2 ]
机构
[1] Huazhong Univ Sci & Technol, Tongji Hosp, Dept Emergency, Tongji Med Coll, Wuhan, Peoples R China
[2] Huazhong Univ Sci & Technol, Sch Artificial Intelligence & Automat, Wuhan, Peoples R China
[3] Luxembourg Ctr Syst Biomed, Luxembourg, Luxembourg
[4] Univ Cambridge, Dept Plant Sci, Cambridge, England
[5] Huazhong Univ Sci & Technol, Sch Mech Sci & Engn, Wuhan, Peoples R China
[6] Huazhong Univ Sci & Technol, Tongji Hosp, Dept Informat Management, Tongji Med Coll, Wuhan, Peoples R China
[7] Huazhong Univ Sci & Technol, Wuxi Res Inst, Wuhan, Peoples R China
[8] Huazhong Univ Sci & Technol, Tongji Hosp, Dept Anesthesiol, Tongji Med Coll, Wuhan, Peoples R China
[9] Wuhan Univ Sci & Technol, Sch Informat Sci & Engn, Wuhan, Peoples R China
关键词
CORONAVIRUS;
D O I
10.1038/s42256-020-0180-7
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
The sudden increase in COVID-19 cases is putting high pressure on healthcare services worldwide. At this stage, fast, accurate and early clinical assessment of the disease severity is vital. To support decision making and logistical planning in healthcare systems, this study leverages a database of blood samples from 485 infected patients in the region of Wuhan, China, to identify crucial predictive biomarkers of disease mortality. For this purpose, machine learning tools selected three biomarkers that predict the mortality of individual patients more than 10 days in advance with more than 90% accuracy: lactic dehydrogenase (LDH), lymphocyte and high-sensitivity C-reactive protein (hs-CRP). In particular, relatively high levels of LDH alone seem to play a crucial role in distinguishing the vast majority of cases that require immediate medical attention. This finding is consistent with current medical knowledge that high LDH levels are associated with tissue breakdown occurring in various diseases, including pulmonary disorders such as pneumonia. Overall, this Article suggests a simple and operable decision rule to quickly predict patients at the highest risk, allowing them to be prioritized and potentially reducing the mortality rate. Early and accurate clinical assessment of disease severity in COVID-19 patients is essential for planning the allocation of scarce hospital resources. An explainable machine learning tool trained on blood sample data from 485 patients from Wuhan selected three biomarkers for predicting mortality of individual patients with high accuracy.
引用
收藏
页码:283 / +
页数:8
相关论文
共 20 条
[1]  
[Anonymous], 2020, J FORENSIC MED, DOI DOI 10.1057/S41307-018-0114-8
[2]  
[Anonymous], 2020, DIAGN TREATM INF NEW, Vfifth
[3]   Plasma C-Reactive Protein Levels Are Associated With Improved Outcome in ARDS [J].
Bajwa, Ednan K. ;
Khan, Uzma A. ;
Januzzi, James L. ;
Gong, Michelle N. ;
Thompson, Taylor ;
Christiani, David C. .
CHEST, 2009, 136 (02) :471-480
[4]   A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster [J].
Chan, Jasper Fuk-Woo ;
Yuan, Shuofeng ;
Kok, Kin-Hang ;
To, Kelvin Kai-Wang ;
Chu, Hin ;
Yang, Jin ;
Xing, Fanfan ;
Liu, Jieling ;
Yip, Cyril Chik-Yan ;
Poon, Rosana Wing-Shan ;
Tsoi, Hoi-Wah ;
Lo, Simon Kam-Fai ;
Chan, Kwok-Hung ;
Poon, Vincent Kwok-Man ;
Chan, Wan-Mui ;
Ip, Jonathan Daniel ;
Cai, Jian-Piao ;
Cheng, Vincent Chi-Chung ;
Chen, Honglin ;
Hui, Christopher Kim-Ming ;
Yuen, Kwok-Yung .
LANCET, 2020, 395 (10223) :514-523
[5]   XGBoost: A Scalable Tree Boosting System [J].
Chen, Tianqi ;
Guestrin, Carlos .
KDD'16: PROCEEDINGS OF THE 22ND ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 2016, :785-794
[6]  
Feng ZJ, 2020, CHINA CDC WEEKLY, V2, P113, DOI [10.3760/cma.j.issn.0254-6450.2020.02.003, 10.46234/ccdcw2020.032]
[7]   Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor [J].
Ge, Xing-Yi ;
Li, Jia-Lu ;
Yang, Xing-Lou ;
Chmura, Aleksei A. ;
Zhu, Guangjian ;
Epstein, Jonathan H. ;
Mazet, Jonna K. ;
Hu, Ben ;
Zhang, Wei ;
Peng, Cheng ;
Zhang, Yu-Ji ;
Luo, Chu-Ming ;
Tan, Bing ;
Wang, Ning ;
Zhu, Yan ;
Crameri, Gary ;
Zhang, Shu-Yi ;
Wang, Lin-Fa ;
Daszak, Peter ;
Shi, Zheng-Li .
NATURE, 2013, 503 (7477) :535-+
[8]  
Huang CL, 2020, LANCET, V395, P497, DOI [10.1016/S0140-6736(20)30211-7, 10.1016/S0140-6736(20)30183-5]
[9]   Staging of Acute Exacerbation in Patients with Idiopathic Pulmonary Fibrosis [J].
Kishaba, Tomoo ;
Tamaki, Hitoshi ;
Shimaoka, Yousuke ;
Fukuyama, Hajime ;
Yamashiro, Shin .
LUNG, 2014, 192 (01) :141-149
[10]   Structure of SARS coronavirus spike receptor-binding domain complexed with receptor [J].
Li, F ;
Li, WH ;
Farzan, M ;
Harrison, SC .
SCIENCE, 2005, 309 (5742) :1864-1868