The Relation of Signal Transduction to the Sensitivity and Dynamic Range of Bacterial Chemotaxis

被引:9
|
作者
Namba, Toshinori [1 ,2 ]
Nishikawa, Masatoshi [1 ,3 ]
Shibata, Tatsuo [1 ,3 ]
机构
[1] RIKEN Ctr Dev Biol, Phys Biol Lab, Kobe, Hyogo, Japan
[2] Hiroshima Univ, Dept Math & Life Sci, Hiroshima, Japan
[3] CREST, Japan Sci & Technol Agcy, Osaka, Japan
关键词
ESCHERICHIA-COLI; SALMONELLA-TYPHIMURIUM; PRECISE ADAPTATION; ALLOSTERIC MODEL; METHYLATION; RESPONSES; CHEMORECEPTORS; ROBUSTNESS; RECEPTORS; GRADIENTS;
D O I
10.1016/j.bpj.2012.08.034
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Complex networks of interacting molecular components of living cells are responsible for many important processes, such as signal processing and transduction. An important challenge is to understand how the individual properties of these molecular interactions and biochemical transformations determine the system-level properties of biological functions. Here, we address the issue of the accuracy of signal transduction performed by a bacterial chemotaxis system. The chemotaxis sensitivity of bacteria to a chemoattractant gradient has been measured experimentally from bacterial aggregation in a chemoattractant-containing capillary. The observed precision of the chemotaxis depended on environmental conditions such as the concentration and molecular makeup of the chemoattractant. In a quantitative model, we derived the chemotactic response function, which is essential to describing the signal transduction process involved in bacterial chemotaxis. In the presence of a gradient, an analytical solution is derived that reveals connections between the chemotaxis sensitivity and the characteristics of the signaling system, such as reaction rates. These biochemical parameters are integrated into two system-level parameters: one characterizes the efficiency of gradient sensing, and the other is related to the dynamic range of chemotaxis. Thus, our approach explains how a particular signal transduction property affects the system-level performance of bacterial chemotaxis. We further show that the two parameters can be derived from published experimental data from a capillary assay, which successfully characterizes the performance of bacterial chemotaxis.
引用
收藏
页码:1390 / 1399
页数:10
相关论文
共 50 条
  • [31] SIGNAL TRANSDUCTION ROUTES INVOLVED IN EOSINOPHIL CHEMOTAXIS
    KOENDERMAN, L
    MAIKOE, T
    WARRINGA, R
    FASEB JOURNAL, 1992, 6 (04): : A1402 - A1402
  • [32] Lipid chemotaxis and signal transduction in Myxococcus xanthus
    Kearns, DB
    Shimkets, LJ
    TRENDS IN MICROBIOLOGY, 2001, 9 (03) : 126 - 129
  • [33] Dimerization is required for the activity of the protein histidine kinase CheA that mediates signal transduction in bacterial chemotaxis
    Surette, MG
    Levit, M
    Liu, Y
    Lukat, G
    Ninfa, EG
    Ninfa, A
    Stock, JB
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (02) : 939 - 945
  • [34] Mind your B's and R's: bacterial chemotaxis, signal transduction and protein recognition
    Jurica, MS
    Stoddard, BL
    STRUCTURE WITH FOLDING & DESIGN, 1998, 6 (07): : 809 - 813
  • [35] Synthesis and biochemical characterization of an analogue of CheY-phosphate, a signal transduction protein in bacterial chemotaxis
    Halkides, CJ
    Zhu, XY
    Phillion, DP
    Matsumura, P
    Dahlquist, FW
    BIOCHEMISTRY, 1998, 37 (39) : 13674 - 13680
  • [36] Direct sensing and signal transduction during bacterial chemotaxis toward aromatic compounds in Comamonas testosteroni
    Huang, Zhou
    Ni, Bin
    Jiang, Cheng-Ying
    Wu, Yu-Fan
    He, Yun-Zhe
    Parales, Rebecca E.
    Liu, Shuang-Jiang
    MOLECULAR MICROBIOLOGY, 2016, 101 (02) : 224 - 237
  • [37] ASSEMBLY OF AN MCP RECEPTOR, CHEW, AND KINASE CHEA COMPLEX IN THE BACTERIAL CHEMOTAXIS SIGNAL TRANSDUCTION PATHWAY
    GEGNER, JA
    GRAHAM, DR
    ROTH, AF
    DAHLQUIST, FW
    CELL, 1992, 70 (06) : 975 - 982
  • [38] Ligand Depletion in vivo Modulates the Dynamic Range and Cooperativity of Signal Transduction
    Edelstein, Stuart J.
    Stefan, Melanie I.
    Le Novere, Nicolas
    PLOS ONE, 2010, 5 (01):
  • [39] Ligand Depletion in vivo Modulates the Dynamic Range of Cooperative Signal Transduction
    Edelstein, Stuart J.
    Stefan, Melanie
    Le Novere, Nicolas
    BIOPHYSICAL JOURNAL, 2010, 98 (03) : 45A - 45A
  • [40] Fidelity in bacterial signal transduction
    不详
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2005, 22 (06): : 794 - 795