Phylogenomics supports Panpulmonata: Opisthobranch paraphyly and key evolutionary steps in a major radiation of gastropod molluscs

被引:55
作者
Kocot, Kevin M. [1 ]
Halanych, Kenneth M. [1 ]
Krug, Patrick J. [2 ]
机构
[1] Auburn Univ, Dept Biol Sci, Auburn, AL 36830 USA
[2] Calif State Univ Los Angeles, Dept Biol Sci, Los Angeles, CA 90032 USA
基金
美国国家科学基金会;
关键词
Gastropoda; Heterobranch; Opisthobranch; Pulmonate; Phylogenomics; Radiation; TRANSCRIPTOMIC EVIDENCE; EUTHYNEURAN GASTROPODS; SEA; SLUGS; EXPRESSION; BIOLOGY; ORIGIN; TREES;
D O I
10.1016/j.ympev.2013.07.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pulmonates, with over 30,000 described species, represent the largest radiation of non-marine animals outside of Arthropoda. The pulmonate lung was a key evolutionary innovation enabling diversification of terrestrial and freshwater snails and slugs. However, recent studies drew conflicting conclusions about pulmonate monophyly, and support for a sister group is lacking, hindering our understanding of this major animal radiation. Analyses of mitochondrial protein-coding genes recovered a paraphyletic Pulmonata grading into a monophyletic Opisthobranchia, a traditional group of sea slugs long considered sister to pulmonates. Conversely, analyses of datsets dominated by nuclear rDNA indicated Opisthobranchia is paraphyletic with respect to Pulmonata. No study resolved the placement of two key taxa: Sacoglossa, an opisthobranch group including photosynthetic sea slugs, and Siphonarioidea, intertidal limpet-like snails traditionally in Pulmonata. To examine evolutionary relationships at the base of the pulmonate radiation, we performed a phylogenomic analysis of 102 nuclear protein-coding gene regions for 19 gastropods. Opisthobranchia was recovered as paraphyletic with respect to Panpulmonata, a clade in which Sacoglossa was sister to Pulmonata, with Siphonarioidea as the basal pulmonate lineage. Siphonarioideans share a similar gill structure with shelled sacoglossans but lack the contractile pneumostome of pulmonates, suggesting descent from an evolutionary intermediate that facilitated the pulmonate radiation into non-marine habitats. (C) 2013 Elsevier Inc. All rights reserved.
引用
收藏
页码:764 / 771
页数:8
相关论文
共 54 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]  
[Anonymous], FRONTIERS ZOOLOGY
[3]   DNA sequence quality trimming and vector removal [J].
Chou, HH ;
Holmes, MH .
BIOINFORMATICS, 2001, 17 (12) :1093-1104
[4]   Evolutionary relationships of euthyneuran gastropods (Mollusca): a cladistic re-evaluation of morphological characters [J].
Dayrat, B ;
Tillier, S .
ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2002, 135 (04) :403-470
[5]   Phylogenetic relationships and evolution of pulmonate gastropods (Mollusca): New insights from increased taxon sampling [J].
Dayrat, Benoit ;
Conrad, Michele ;
Balayan, Shaina ;
White, Tracy R. ;
Albrecht, Christian ;
Golding, Rosemary ;
Gomes, Suzete R. ;
Harasewych, M. G. ;
de Frias Martins, Antonio Manuel .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2011, 59 (02) :425-437
[6]   THE STRUCTURE OF THE SECONDARY GILLS OF SIPHONARIA-CAPENSIS (GASTROPODA, PULMONATA) [J].
DEVILLIERS, CJ ;
HODGSON, AN .
JOURNAL OF MOLLUSCAN STUDIES, 1987, 53 :129-138
[7]  
Dieuzeide R., 1935, THESIS U BORDEAUX BO
[8]   The long way to diversity - Phylogeny and evolution of the Heterobranchia (Mollusca: Gastropoda) [J].
Dinapoli, Angela ;
Klussmann-Kolb, Annette .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2010, 55 (01) :60-76
[9]   Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability [J].
Douady, CJ ;
Delsuc, F ;
Boucher, Y ;
Doolittle, WF ;
Douzery, EJP .
MOLECULAR BIOLOGY AND EVOLUTION, 2003, 20 (02) :248-254
[10]   EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration [J].
Forment, Javier ;
Gilabert, Francisco ;
Robles, Antonio ;
Conejero, Vicente ;
Nuez, Fernando ;
Blanca, Jose M. .
BMC BIOINFORMATICS, 2008, 9 (1)