NMR studies of ligand binding

被引:39
|
作者
Nitsche, Christoph [1 ]
Otting, Gottfried [1 ]
机构
[1] Australian Natl Univ, Res Sch Chem, Canberra, ACT 2601, Australia
基金
澳大利亚研究理事会;
关键词
PARAMAGNETIC RELAXATION ENHANCEMENT; VIRUS NS2B-NS3 PROTEASE; SOLID-STATE NMR; PSEUDOCONTACT SHIFTS; DRUG DISCOVERY; LEAD DISCOVERY; CHEMICAL-SHIFT; SPECTROSCOPY; COMPLEXES; PROTEINS;
D O I
10.1016/j.sbi.2017.09.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
NMR spectroscopy is an established tool in drug discovery, but its strength is commonly regarded to be largely confined to the early stages of hit discovery and fragment based drug design, where NMR offers unique capabilities of characterizing the binding modes of ligand molecules that bind sufficiently weakly to be in rapid exchange between bound and free state. Here we, first, provide a meta-review of recent reviews on NMR studies of ligand binding and, second, review recent progress towards NMR characterization of the ligand binding mode in stable protein-ligand complexes, with particular emphasis on the global positioning system (GPS) approach enabled by paramagnetic lanthanide tags.
引用
收藏
页码:16 / 22
页数:7
相关论文
共 50 条
  • [1] Sensitive NMR Approach for Determining the Binding Mode of Tightly Binding Ligand Molecules to Protein Targets
    Chen, Wan-Na
    Nitsche, Christoph
    Pilla, Kala Bharath
    Graham, Bim
    Huber, Thomas
    Klein, Christian D.
    Otting, Gottfried
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2016, 138 (13) : 4539 - 4546
  • [2] NMR screening and studies of target - ligand interactions
    Polshakov, Vladimir I.
    Batuev, Evgeniy A.
    Mantsyzov, Alexey B.
    RUSSIAN CHEMICAL REVIEWS, 2019, 88 (01) : 59 - 98
  • [3] Detection of ligand binding to glycopolymers using saturation transfer difference NMR
    Muzulu, Janet
    Basu, Amit
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2021, 23 (38) : 21934 - 21940
  • [4] Enthalpic Efficiency of Ligand Binding
    Ferenczy, Gyoergy G.
    Keseru, Gyoergy M.
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2010, 50 (09) : 1536 - 1541
  • [5] NMR methods for exploring 'dark' states in ligand binding and protein-protein interactions
    Tugarinov, Vitali
    Ceccon, Alberto
    Clore, G. Marius
    PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY, 2022, 128 : 1 - 24
  • [6] General and Efficient Approach for NMR Studies of Peptide Dynamics in Class I MHC Peptide Binding Grooves
    Insaidoo, Francis K.
    Zajicek, Jaroslav
    Baker, Brian M.
    BIOCHEMISTRY, 2009, 48 (41) : 9708 - 9710
  • [7] STD NMR as a Technique for Ligand Screening and Structural Studies
    Walpole, Samuel
    Monaco, Serena
    Nepravishta, Ridvan
    Angulo, Jesus
    BIOLOGICAL NMR, PT B, 2019, 615 : 423 - 451
  • [8] Fast and Efficient Fragment-Based Lead Generation by Fully Automated Processing and Analysis of Ligand-Observed NMR Binding Data
    Peng, Chen
    Frommlet, Alexandra
    Perez, Manuel
    Cobas, Carlos
    Blechschmidt, Anke
    Dominguez, Santiago
    Lingel, Andreas
    JOURNAL OF MEDICINAL CHEMISTRY, 2016, 59 (07) : 3303 - 3310
  • [9] Hyperpolarized Binding Pocket Nuclear Overhauser Effect for Determination of Competitive Ligand Binding
    Lee, Youngbok
    Zeng, Haifeng
    Mazur, Adam
    Wegstroth, Melanie
    Carlomagno, Teresa
    Reese, Marcel
    Lee, Donghan
    Becker, Stefan
    Griesinger, Christian
    Hilty, Christian
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2012, 51 (21) : 5179 - 5182
  • [10] NMR Spectroscopy techniques for screening and identifying ligand binding to protein receptors
    Meyer, B
    Peters, T
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2003, 42 (08) : 864 - 890