Molecular structure of proline

被引:74
作者
Allen, WD [1 ]
Czinki, E
Császár, AG
机构
[1] Univ Georgia, Ctr Computat Chem, Athens, GA 30602 USA
[2] Eotvos Lorand Univ, Dept Theoret Chem, H-1518 Budapest, Hungary
关键词
ab initio calculations; conformation analysis; quartic force field; spectroscopic constants; structural refinement;
D O I
10.1002/chem.200400112
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The molecular structures of the two lowest-energy conformers of proline, Pro-I and Pro-II, have been characterized by ab initio electronic structure computations. An extensive MP2/6-31G* quartic force field for Pro-I, containing 62835 unique elements in the internal coordinate space, was computed to account for anharmonic vibrational effects, including total zero-point contributions to isotopomeric rotational constants. New r(e) and improved r(0) least-squares structural refinements were performed to determine the heavy-atom framework of Pro-I, based on experimentally measured (A. Lesarri, S. Mata, E. J. Cocinero, S. Blanco, J. C. Lopez, J. L. Alonso, Angew. Chem. 2002, 114, 4867; Angew. Chem. Int. Ed. 2002, 41, 4673) rotational constant sets of nine isotopomers and our ab initio data for structural constraints and zero-point vibrational (ZPV) shifts. Without the ab initio constraints, even the extensive set of empirical rotational constants cannot satisfactorily fix the molecular structure of the most stable conformer of proline, a 17-atom molecule with no symmetry. After imposing the ab initio constraints, excellent agreement between theory and experiment is found for the heavy-atom geometric framework, the root-mean-square (rms) residual of the empirical rotational constant fit being cut in half by adding ZPV corrections. The most significant disparity, about 0.07 Angstrom , between the empirical and the best ab initio structures, concerns the r(N...H) distance of the intramolecular hydrogen bond. Some of the experimental quartic centrifugal distortion constants assigned to Pro-II have been corrected based on data obtained from a theoretical force field.
引用
收藏
页码:4512 / 4517
页数:6
相关论文
共 58 条
[1]   Anharmonic force field, vibrational energies, and barrier to inversion of SiH3- [J].
Aarset, K ;
Császár, AG ;
Sibert, EL ;
Allen, WD ;
Schaefer, HF ;
Klopper, W ;
Noga, J .
JOURNAL OF CHEMICAL PHYSICS, 2000, 112 (09) :4053-4063
[2]   ELECTRONIC-STRUCTURE CALCULATIONS ON WORKSTATION COMPUTERS - THE PROGRAM SYSTEM TURBOMOLE [J].
AHLRICHS, R ;
BAR, M ;
HASER, M ;
HORN, H ;
KOLMEL, C .
CHEMICAL PHYSICS LETTERS, 1989, 162 (03) :165-169
[3]   ON THE ABINITIO DETERMINATION OF HIGHER-ORDER FORCE-CONSTANTS AT NONSTATIONARY REFERENCE GEOMETRIES [J].
ALLEN, WD ;
CSASZAR, AG .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (04) :2983-3015
[4]   A SYSTEMATIC STUDY OF MOLECULAR VIBRATIONAL ANHARMONICITY AND VIBRATION-ROTATION INTERACTION BY SELF-CONSISTENT-FIELD HIGHER-DERIVATIVE METHODS - LINEAR POLYATOMIC-MOLECULES [J].
ALLEN, WD ;
YAMAGUCHI, Y ;
CSASZAR, AG ;
CLABO, DA ;
REMINGTON, RB ;
SCHAEFER, HF .
CHEMICAL PHYSICS, 1990, 145 (03) :427-466
[5]  
Allen WD, 1996, MOL PHYS, V89, P1213, DOI 10.1080/00268979609482536
[6]  
ALLEN WD, 1993, NATO ADV SCI INST SE, V410, P343
[7]  
[Anonymous], 1982, Molecular vibrational-rotational spectra
[8]  
BALASUBRAMANIAN R, 1971, INT J PROT RES, V3, P25
[9]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[10]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100