Conformation analysis of nucleic acids and proteins adsorbed on single-shell carbon nanotubes

被引:18
作者
Dovbeshko, G. I. [1 ]
Fesenko, O. M. [1 ]
Obraztsova, E. D. [2 ]
Allakhverdiev, K. R. [3 ,4 ]
Kaja, A. E. [3 ]
机构
[1] Natl Acad Sci Ukraine, Inst Phys, Kiev, Ukraine
[2] Russian Acad Sci, Nat Sci Res Ctr, Inst Gen Phys, Moscow 117901, Russia
[3] TUBITAK, Inst Mat Sci, Gebze, Kochaeli, Turkey
[4] Natl Acad Sci Azerbaijan, Inst Phys, Baku, Azerbaijan
关键词
carbon nanotubes; DNA; polyadenylic acid potassium salt (PolyA); rhibonuclease A; bovine serum albumin; RAMAN-SCATTERING; DNA; SPECTROSCOPY; AFFINITY; SPECTRA; BINDING; SEIRA;
D O I
10.1007/s10947-009-0142-8
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
This paper presents a concise review of the experimental and calculated data reported in the literature on the noncovalent interactions of DNA and proteins with the nonfunctionalized carbon nanotubes. Our Raman scattering and electron microscopy data on carbon nanotubes and SEIRA spectral data on changes in the conformational state of the main biological polymers (DNA, Poly, BSA, and RNase) in reactions with single-shell carbon nanotubes allowed us to define the character of noncovalent interactions in the tube biomolecule system. An analysis of the data showed that reactions of DNA with nanotubes lead to the binding on the surface of the nanotube and form stable complexes with van der Waals interactions, in which stacking plays the major role and which changes the hydrogen bonds in the biological molecule with structure rearrangements. Albumin and RNase are presumably adsorbed at the conventional binding sites of these proteins on the nanotube with participation of hydrophobic interaction and pi stacking, as indicated by structure rearrangements in proteins.
引用
收藏
页码:954 / 961
页数:8
相关论文
共 44 条
  • [1] Applications of Carbon Nanotubes in Biotechnology and Biomedicine
    Bekyarova, Elena
    Ni, Yingchun
    Malarkey, Erik B.
    Montana, Vedrana
    McWilliams, Jared L.
    Haddon, Robert C.
    Parpura, Vladimir
    [J]. JOURNAL OF BIOMEDICAL NANOTECHNOLOGY, 2005, 1 (01) : 3 - 17
  • [2] Enzyme-coated carbon nanotubes as single-molecule biosensors
    Besteman, K
    Lee, JO
    Wiertz, FGM
    Heering, HA
    Dekker, C
    [J]. NANO LETTERS, 2003, 3 (06) : 727 - 730
  • [3] Bianco Alberto, 2004, Expert Opin Drug Deliv, V1, P57, DOI 10.1517/17425247.1.1.57
  • [4] Solution properties of single-walled carbon nanotubes
    Chen, J
    Hamon, MA
    Hu, H
    Chen, YS
    Rao, AM
    Eklund, PC
    Haddon, RC
    [J]. SCIENCE, 1998, 282 (5386) : 95 - 98
  • [5] Noncovalent sidewall functionalization of single-walled carbon nanotubes for protein immobilization
    Chen, RJ
    Zhang, YG
    Wang, DW
    Dai, HJ
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (16) : 3838 - 3839
  • [6] Cui Daxiang, 2004, Mech Chem Biosyst, V1, P113
  • [7] DOVBESHKO G, 2007, 12 EUR C SPECTR BIOL, P144
  • [8] DOVBESHKO G, 2005, 7 INT C MOL SPECTR, P16
  • [9] Dovbeshko G. I., 2004, Semiconductor physics, quantum electronics optoelectronics, V7, P411
  • [10] Vibrational spectra of carbonaceous materials: A SEIRA spectroscopy versus FTIR and Raman
    Dovbeshko, GI
    Gnatyuk, OP
    Dovbeshko, GI
    Nazarova, AN
    Sementsov, YI
    Obraztsova, ED
    [J]. FULLERENES NANOTUBES AND CARBON NANOSTRUCTURES, 2005, 13 : 393 - 400