Site-specific dynamic nuclear polarization of hydration water as a generally applicable approach to monitor protein aggregation

被引:39
作者
Pavlova, Anna [1 ]
McCarney, Evan R. [1 ]
Peterson, Dylan W. [2 ]
Dahlquist, Frederick W. [1 ,2 ]
Lew, John [2 ]
Han, Songi [1 ]
机构
[1] Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
[2] Univ Calif Santa Barbara, Dept Mol Cellular & Dev Biol, Santa Barbara, CA 93106 USA
关键词
PAIRED HELICAL FILAMENTS; LABELED SIDE-CHAINS; ALZHEIMERS-DISEASE; T4; LYSOZYME; RESONANCE-SPECTROSCOPY; MAGNETIC-RESONANCE; TAU; NMR; CONFORMATION; CORE;
D O I
10.1039/b906101k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present a generally applicable approach for monitoring protein aggregation by detecting changes in surface hydration water dynamics and the changes in solvent accessibility of specific protein sites, as protein aggregation proceeds in solution state. This is made possible through the Overhauser dynamic nuclear polarization (DNP) of water interacting with stable nitroxide spin labels tethered to specific proteins sites. This effect is highly localized due to the magnetic dipolar nature of the electron-proton spin interaction, with >80% of their interaction occurring within 5 A between the unpaired electron of the spin label and the proton of water. We showcase our tool on the aggregation of tau proteins, whose fibrillization is linked to neurodegenerative disease pathologies known as taupathies. We demonstrate that the DNP approach to monitor local changes in hydration dynamics with residue specificity and local contrast can distinguish specific and neat protein-protein packing leading to fibers from non-specific protein agglomeration or precipitation. The ability to monitor tau assembly with local, residue-specific, resolution, under ambient conditions and in solution state will help unravel the mechanism and structural characteristics of the gradual process of tau aggregation into amyloid fibers, which remains unclear to this day.
引用
收藏
页码:6833 / 6839
页数:7
相关论文
共 37 条
[1]   PRINCIPLES OF DYNAMIC NUCLEAR-POLARIZATION [J].
ABRAGAM, A ;
GOLDMAN, M .
REPORTS ON PROGRESS IN PHYSICS, 1978, 41 (03) :395-467
[2]   Increase in signal-to-noise ratio of >10,000 times in liquid-state NMR [J].
Ardenkjaer-Larsen, JH ;
Fridlund, B ;
Gram, A ;
Hansson, G ;
Hansson, L ;
Lerche, MH ;
Servin, R ;
Thaning, M ;
Golman, K .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (18) :10158-10163
[3]  
Armstrong BD., 2009, J Am Chem Soc
[4]   Portable X-band system for solution state dynamic nuclear polarization [J].
Armstrong, Brandon D. ;
Lingwood, Mark D. ;
McCarney, Evan R. ;
Brown, Elliott R. ;
Bluemler, Peter ;
Han, Songi .
JOURNAL OF MAGNETIC RESONANCE, 2008, 191 (02) :273-281
[5]   A new model for Overhauser enhanced nuclear magnetic resonance using nitroxide radicals [J].
Armstrong, Brandon D. ;
Han, Songi .
JOURNAL OF CHEMICAL PHYSICS, 2007, 127 (10)
[6]  
Bajaj V.S., 2007, Journal of Magnetic Resonance
[7]   Describing the structure and assembly of protein filaments by EPR spectroscopy of spin-labeled side chains [J].
Budamagunta, Madbu S. ;
Hess, John F. ;
Fitzgerald, Paul G. ;
Voss, John C. .
CELL BIOCHEMISTRY AND BIOPHYSICS, 2007, 48 (01) :45-53
[8]   Investigation of α-synuclein fibril structure by site-directed spin labeling [J].
Chen, Min ;
Margittai, Martin ;
Chen, Jeannie ;
Langen, Ralf .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (34) :24970-24979
[9]   Molecular motion of spin labeled side chains in α-helices:: Analysis by variation of side chain structure [J].
Columbus, L ;
Kálai, T ;
Jekö, J ;
Hideg, K ;
Hubbell, WL .
BIOCHEMISTRY, 2001, 40 (13) :3828-3846
[10]   A nucleated assembly mechanism of Alzheimer paired helical filaments [J].
Friedhoff, P ;
von Bergen, M ;
Mandelkow, EM ;
Davies, P ;
Mandelkow, E .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (26) :15712-15717