Mutual induction of transcription factor PPARγ and microRNAs miR-145 and miR-329

被引:44
作者
Dharap, Ashutosh
Pokrzywa, Courtney
Murali, Shruthi
Kaimal, Balarama
Vemuganti, Raghu [1 ]
机构
[1] Univ Wisconsin, Dept Neurol Surg, Madison, WI 53792 USA
关键词
gene induction; miRNA; non-coding RNA; peroxisome proliferator-activated receptor; promoters; transcription factor; PROLIFERATOR-ACTIVATED RECEPTORS; TRANSIENT FOCAL ISCHEMIA; AGONISTS; MECHANISMS; EXPRESSION; PATHWAYS; DISEASE; TARGETS; INJURY; GENES;
D O I
10.1111/jnc.13220
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MicroRNAs (miRNAs) are small non-coding RNAs that are known to control mRNA translation. Most miRNAs are transcribed from specific genes with well-defined promoters located throughout the genome. The mechanisms that control miRNA expression under normal and pathological conditions are not yet understood clearly. Peroxisome proliferator-activated receptor (PPAR) gamma is a ligand-activated transcription factor that is extensively distributed in the CNS. PPAR gamma activation induces neuroprotection by modulating genes that contain peroxisome proliferator response elements (PPREs) in their promoters. We presently evaluated if PPAR gamma modulates miRNA expression. When adult rats were treated with PPAR gamma agonist rosiglitazone, expression of 28 miRNAs altered significantly (12 up-and 16 down-regulated; 3-119 fold) in the cerebral cortex compared to vehicle-treated controls. In silico analysis showed 1-5 PPREs in the putative promoter regions (within 1 Kb upstream of the transcription start site) of these miRNA genes. Cotransfection with a PPAR gamma constitutively expressing vector significantly induced the miR-145 and miR-329 promoter vectors (each have four PPREs), which was curtailed by point mutations of PPREs in their promoters. Interestingly, the PPAR gamma promoter has binding sites for both these miRNAs and transfection with miR-329 mimic and miR-145 mimic induced the PPAR gamma expression. Thus, these studies show a cyclical induction of miRNAs and PPAR gamma, indicating that the pleiotropic beneficial effects of PPARc agonists might be modulated in part by miRNAs and their down-stream mRNAs.
引用
收藏
页码:139 / 146
页数:8
相关论文
共 23 条
[1]   The microRNA.org resource: targets and expression [J].
Betel, Doron ;
Wilson, Manda ;
Gabow, Aaron ;
Marks, Debora S. ;
Sander, Chris .
NUCLEIC ACIDS RESEARCH, 2008, 36 :D149-D153
[2]   A comparison of normalization methods for high density oligonucleotide array data based on variance and bias [J].
Bolstad, BM ;
Irizarry, RA ;
Åstrand, M ;
Speed, TP .
BIOINFORMATICS, 2003, 19 (02) :185-193
[3]   PPAR-γ: Therapeutic Prospects in Parkinson's Disease [J].
Carta, Anna R. .
CURRENT DRUG TARGETS, 2013, 14 (07) :743-751
[4]   Matlnspector and beyond: promoter analysis based on transcription factor binding sites [J].
Cartharius, K ;
Frech, K ;
Grote, K ;
Klocke, B ;
Haltmeier, M ;
Klingenhoff, A ;
Frisch, M ;
Bayerlein, M ;
Werner, T .
BIOINFORMATICS, 2005, 21 (13) :2933-2942
[5]   Transient focal ischemia induces extensive temporal changes in rat cerebral MicroRNAome [J].
Dharap, Ashuthosh ;
Bowen, Kellie ;
Place, Robert ;
Li, Long-Cheng ;
Vemuganti, Raghu .
JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM, 2009, 29 (04) :675-687
[6]   MicroRNA miR-324-3p Induces Promoter-Mediated Expression of RelA Gene [J].
Dharap, Ashutosh ;
Pokrzywa, Courtney ;
Murali, Shruthi ;
Pandi, Gopal ;
Vemuganti, Raghu .
PLOS ONE, 2013, 8 (11)
[7]   Ischemic pre-conditioning alters cerebral microRNAs that are upstream to neuroprotective signaling pathways [J].
Dharap, Ashutosh ;
Vemuganti, Raghu .
JOURNAL OF NEUROCHEMISTRY, 2010, 113 (06) :1685-1691
[8]   Peroxisome proliferator-activated receptor agonist regulation of glial activation: Relevance to CNS inflammatory disorders [J].
Drew, Paul D. ;
Xu, Jihong ;
Storer, Paul D. ;
Chavis, Janet A. ;
Racke, Michael K. .
NEUROCHEMISTRY INTERNATIONAL, 2006, 49 (02) :183-189
[9]   In Vivo Actions of Peroxisome Proliferator-Activated Receptors Glycemic control, insulin sensitivity, and insulin secretion [J].
Eldor, Roy ;
DeFronzo, Ralph A. ;
Abdul-Ghani, Muhammad .
DIABETES CARE, 2013, 36 :S162-S174
[10]   Peroxisome proliferator-activated receptors: insight into multiple cellular functions [J].
Escher, P ;
Wahli, W .
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2000, 448 (02) :121-138