Protein dynamics;
Slow chemical exchange;
Chemical exchange saturation transfer (CEST);
Protein folding;
Im7;
DISPERSION NMR-SPECTROSCOPY;
TIME-SCALE DYNAMICS;
CHEMICAL-SHIFTS;
C-ALPHA;
ACCURATE MEASUREMENT;
MOLECULAR-DYNAMICS;
PULSE SEQUENCES;
RELAXATION;
STATES;
INTERMEDIATE;
D O I:
10.1007/s10858-013-9711-4
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
A C-13(alpha) chemical exchange saturation transfer based experiment is presented for the study of protein systems undergoing slow interconversion between an 'observable' ground state and one or more 'invisible' excited states. Here a labeling strategy whereby [2-C-13]-glucose is the sole carbon source is exploited, producing proteins with C-13 at the C-alpha position, while the majority of residues remain unlabeled at CO or C-beta. The new experiment is demonstrated with an application to the folding reaction of the Im7 protein that involves an on-pathway excited state. The obtained excited state C-13(alpha) chemical shifts are cross validated by comparison to values extracted from analysis of CPMG relaxation dispersion profiles, establishing the utility of the methodology.
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
BAI, YW
SOSNICK, TR
论文数: 0引用数: 0
h-index: 0
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
SOSNICK, TR
MAYNE, L
论文数: 0引用数: 0
h-index: 0
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
MAYNE, L
ENGLANDER, SW
论文数: 0引用数: 0
h-index: 0
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Boehr, David D.
Wright, Peter E.
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
机构:
Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USAUniv Cambridge, Dept Chem, Cambridge CB2 1EW, England
Robustelli, Paul
De Simone, Alfonso
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
Univ London Imperial Coll Sci Technol & Med, Div Mol Biosci, London SW7 2AZ, EnglandUniv Cambridge, Dept Chem, Cambridge CB2 1EW, England
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
BAI, YW
SOSNICK, TR
论文数: 0引用数: 0
h-index: 0
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
SOSNICK, TR
MAYNE, L
论文数: 0引用数: 0
h-index: 0
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
MAYNE, L
ENGLANDER, SW
论文数: 0引用数: 0
h-index: 0
机构:
UNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USAUNIV PENN, SCH MED, DEPT BIOCHEM & BIOPHYS, JOHNSON RES FDN, PHILADELPHIA, PA 19104 USA
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Boehr, David D.
Wright, Peter E.
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
机构:
Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USAUniv Cambridge, Dept Chem, Cambridge CB2 1EW, England
Robustelli, Paul
De Simone, Alfonso
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
Univ London Imperial Coll Sci Technol & Med, Div Mol Biosci, London SW7 2AZ, EnglandUniv Cambridge, Dept Chem, Cambridge CB2 1EW, England