Reconstruction of initial pressure from limited view photoacoustic images using deep learning

被引:78
作者
Waibel, Dominik [1 ]
Groehl, Janek [1 ,4 ]
Isensee, Fabian [2 ]
Kirchner, Thomas [1 ,3 ]
Maier-Hein, Klaus [2 ,4 ]
Maier-Hein, Lena [1 ,4 ]
机构
[1] German Canc Res Ctr, Div Comp Assisted Med Intervent CAMI, Heidelberg, Germany
[2] German Canc Res Ctr, Div Med Image Comp MIC, Heidelberg, Germany
[3] Heidelberg Univ, Dept Phys & Astron, Heidelberg, Germany
[4] Heidelberg Univ, Med Fac, Heidelberg, Germany
来源
PHOTONS PLUS ULTRASOUND: IMAGING AND SENSING 2018 | 2018年 / 10494卷
关键词
Photoacoustics; Machine learning; Deep learning; Photoacoustic tomography; Limited view problem; TOMOGRAPHY; LIGHT;
D O I
10.1117/12.2288353
中图分类号
TH742 [显微镜];
学科分类号
摘要
Quantification of tissue properties with photoacoustic (PA) imaging typically requires a highly accurate representation of the initial pressure distribution in tissue. Almost all PA scanners reconstruct the PA image only from a partial scan of the emitted sound waves. Especially handheld devices, which have become increasingly popular due to their versatility and ease of use, only provide limited view data because of their geometry. Owing to such limitations in hardware as well as to the acoustic attenuation in tissue, state-of-the-art reconstruction methods deliver only approximations of the initial pressure distribution. To overcome the limited view problem, we present a machine learning-based approach to the reconstruction of initial pressure from limited view PA data. Our method involves a fully convolutional deep neural network based on a U-Net-like architecture with pixel-wise regression loss on the acquired PA images. It is trained and validated on in silico data generated with Monte Carlo simulations. In an initial study we found an increase in accuracy over the state-of-the-art when reconstructing simulated linear-array scans of blood vessels.
引用
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页数:8
相关论文
共 26 条
[1]  
[Anonymous], ARXIV170404587
[2]  
[Anonymous], 2015, P MICCAI NEW YORK US
[3]   Angiogenesis in cancer and other diseases [J].
Carmeliet, P ;
Jain, RK .
NATURE, 2000, 407 (6801) :249-257
[4]  
Hauptmann A, 2017, ARXIV170809832CSMATH
[5]   Coupling 3D Monte Carlo light transport in optically heterogeneous tissues to photoacoustic signal generation [J].
Jacques, Steven L. .
PHOTOACOUSTICS, 2014, 2 (04) :137-142
[6]  
Jager Paul F., 2017, Medical Image Computing and Computer Assisted Intervention MICCAI 2017. 20th International Conference. Proceedings: LNCS 10433, P664, DOI 10.1007/978-3-319-66182-7_76
[7]  
Kirchner T., 2017, ARXIV170603595PHYSIC
[8]   Explicit inversion formulae for the spherical mean Radon transform [J].
Kunyansky, Leonid A. .
INVERSE PROBLEMS, 2007, 23 (01) :373-383
[9]   A survey on deep learning in medical image analysis [J].
Litjens, Geert ;
Kooi, Thijs ;
Bejnordi, Babak Ehteshami ;
Setio, Arnaud Arindra Adiyoso ;
Ciompi, Francesco ;
Ghafoorian, Mohsen ;
van der Laak, Jeroen A. W. M. ;
van Ginneken, Bram ;
Sanchez, Clara I. .
MEDICAL IMAGE ANALYSIS, 2017, 42 :60-88
[10]   The Delay Multiply and Sum Beamforming Algorithm in Ultrasound B-Mode Medical Imaging [J].
Matrone, Giulia ;
Savoia, Alessandro Stuart ;
Caliano, Giosue ;
Magenes, Giovanni .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2015, 34 (04) :940-949