Extraction and biomolecular analysis of dermal interstitial fluid collected with hollow microneedlesis

被引:183
作者
Miller, Philip R. [1 ]
Taylor, Robert M. [2 ]
Bao Quoc Tran [3 ]
Boyd, Gabrielle [3 ]
Glaros, Trevor [4 ]
Chavez, Victor H. [1 ]
Krishnakumar, Raga [5 ]
Sinha, Anupama [5 ]
Poorey, Kunal [5 ]
Williams, Kelly P. [5 ]
Branda, Steven S. [6 ]
Baca, Justin T. [2 ]
Polsky, Ronen [1 ]
机构
[1] Sandia Natl Labs, Nano & Micro Sensors, Albuquerque, NM 87185 USA
[2] Univ New Mexico, Dept Emergency Med, Albuquerque, NM 87131 USA
[3] Excet Inc, 6225 Brandon Ave,Suite 360, Springfield, VA 22150 USA
[4] US Army, Res & Technol Directorate, Edgewood Chem Biol Ctr, Aberdeen Proving Ground, MD 21010 USA
[5] Sandia Natl Labs, Syst Biol, Livermore, CA 94551 USA
[6] Sandia Natl Labs, Biomass Sci & Convers Technol, Livermore, CA 94551 USA
关键词
SUCTION BLISTER FLUID; INTERMITTENT HYPOXIA; HUMAN MONOCYTES; IDENTIFICATION; GLUCOSE; TRANSCRIPTOME; SEPARATION; ARRAY; GENE;
D O I
10.1038/s42003-018-0170-z
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Dermal interstitial fluid (ISF) is an underutilized information-rich biofluid potentially useful in health status monitoring applications whose contents remain challenging to characterize. Here, we present a facile microneedle approach for dermal ISF extraction with minimal pain and no blistering for human subjects and rats. Extracted ISF volumes were sufficient for determining transcriptome, and proteome signatures. We noted similar profiles in ISF, serum, and plasma samples, suggesting that ISF can be a proxy for direct blood sampling. Dynamic changes in RNA-seq were recorded in ISF from induced hypoxia conditions. Finally, we report the first isolation and characterization, to our knowledge, of exosomes from dermal ISF. The ISF exosome concentration is 12-13 times more enriched when compared to plasma and serum and represents a previously unexplored biofluid for exosome isolation. This minimally invasive extraction approach can enable mechanistic studies of ISF and demonstrates the potential of ISF for real-time health monitoring applications.
引用
收藏
页数:11
相关论文
共 47 条
[1]   Minimally-invasive transepidermal potentiometry with microneedle salt bridge [J].
Abe, Yuina ;
Nagamine, Kuniaki ;
Nakabayashi, Mayu ;
Kai, Hiroyuki ;
Kaji, Hirokazu ;
Yamauchi, Takeshi ;
Yamasaki, Kenshi ;
Nishizawa, Matsuhiko .
BIOMEDICAL MICRODEVICES, 2016, 18 (04)
[2]   HTSeq-a Python']Python framework to work with high-throughput sequencing data [J].
Anders, Simon ;
Pyl, Paul Theodor ;
Huber, Wolfgang .
BIOINFORMATICS, 2015, 31 (02) :166-169
[3]  
[Anonymous], 2003, GENOME BIOL
[4]   Isolation of Exosomes from Blood Plasma: Qualitative and Quantitative Comparison of Ultracentrifugation and Size Exclusion Chromatography Methods [J].
Baranyai, Tamas ;
Herczeg, Kata ;
Onodi, Zsofia ;
Voszka, Istvan ;
Modos, Karoly ;
Marton, Nikolett ;
Nagy, Gyoergy ;
Maeger, Imre ;
Wood, Matthew J. ;
El Andaloussi, Samir ;
Palinkas, Zoltan ;
Kumar, Vikas ;
Nagy, Pater ;
Kittel, Agnes ;
Buzas, Edit Iren ;
Ferdinandy, Peter ;
Giricz, Zoltan .
PLOS ONE, 2015, 10 (12)
[5]   Mechanisms of intermittent hypoxia induced hypertension [J].
Bosc, Laura V. Gonzalez ;
Resta, Thomas ;
Walker, Benjimen ;
Kanagy, Nancy L. .
JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2010, 14 (1-2) :3-17
[6]   Hypoxia modifies the transcriptome of primary human monocytes: Modulation of novel immune-related genes and identification of CC-chemokine ligand 20 as a new hypoxia-inducible gene [J].
Bosco, Maria Carla ;
Puppo, Maura ;
Santangelo, Clara ;
Anfosso, Luca ;
Pfeffer, Ulrich ;
Fardin, Paolo ;
Battaglia, Florinda ;
Varesio, Luigi .
JOURNAL OF IMMUNOLOGY, 2006, 177 (03) :1941-1955
[7]   Exosomes in bodily fluids are a highly stable resource of disease biomarkers [J].
Boukouris, Stephanie ;
Mathivanan, Suresh .
PROTEOMICS CLINICAL APPLICATIONS, 2015, 9 (3-4) :358-367
[8]   A Swellable Microneedle Patch to Rapidly Extract Skin Interstitial Fluid for Timely Metabolic Analysis [J].
Chang, Hao ;
Zheng, Mengjia ;
Yu, Xiaojun ;
Aung Than ;
Seeni, Razina Z. ;
Kang, Rongjie ;
Tian, Jingqi ;
Duong Phan Khanh ;
Liu, Linbo ;
Chen, Peng ;
Xu, Chenjie .
ADVANCED MATERIALS, 2017, 29 (37)
[9]  
Collison ME, 1999, CLIN CHEM, V45, P1665
[10]   1D and 2D annotation enrichment: a statistical method integrating quantitative proteomics with complementary high-throughput data [J].
Cox, Juergen ;
Mann, Matthias .
BMC BIOINFORMATICS, 2012, 13 :S12