A heterozygous moth genome provides insights into herbivory and detoxification

被引：444

作者：

You, Minsheng ^{[1
,2
]}

Yue, Zhen ^{[3
]}

He, Weiyi ^{[1
,2
]}

Yang, Xinhua ^{[3
]}

Yang, Guang ^{[1
,2
]}

Xie, Miao ^{[1
,2
]}

Zhan, Dongliang ^{[3
]}

Baxter, Simon W. ^{[4
,5
]}

Vasseur, Liette ^{[1
,2
,6
]}

Gurr, Geoff M. ^{[1
,2
,7
]}

Douglas, Carl J. ^{[1
,2
,8
]}

Bai, Jianlin ^{[1
,2
]}

Wang, Ping ^{[9
]}

Cui, Kai ^{[1
,2
]}

Huang, Shiguo ^{[1
,2
]}

Li, Xianchun ^{[10
]}

Zhou, Qing ^{[3
]}

Wu, Zhangyan ^{[3
]}

Chen, Qilin ^{[3
]}

Liu, Chunhui ^{[1
,2
]}

Wang, Bo ^{[3
]}

Li, Xiaojing ^{[1
,2
]}

Xu, Xiufeng ^{[1
,2
]}

Lu, Changxin ^{[3
]}

Hu, Min ^{[3
]}

Davey, John W. ^{[11
]}

Smith, Sandy M. ^{[1
,2
,12
]}

Chen, Mingshun ^{[13
,14
]}

Xia, Xiaofeng ^{[1
,2
]}

Tang, Weiqi ^{[1
,2
]}

Ke, Fushi ^{[1
,2
]}

Zheng, Dandan ^{[1
,2
]}

Hu, Yulan ^{[1
,2
]}

Song, Fengqin ^{[1
,2
]}

You, Yanchun ^{[1
,2
]}

Ma, Xiaoli ^{[1
,2
]}

Peng, Lu ^{[1
,2
]}

Zheng, Yunkai ^{[1
,2
]}

Liang, Yong ^{[1
,2
]}

Chen, Yaqiong ^{[1
,2
]}

Yu, Liying ^{[1
,2
]}

Zhang, Younan ^{[1
,2
]}

Liu, Yuanyuan ^{[8
]}

Li, Guoqing ^{[3
]}

Fang, Lin ^{[3
]}

Li, Jingxiang ^{[3
]}

Zhou, Xin ^{[3
]}

Luo, Yadan ^{[3
]}

Gou, Caiyun ^{[3
]}

Wang, Junyi ^{[3
]}

机构：

[1] Fujian Agr & Forestry Univ, Inst Appl Ecol, Fuzhou, Peoples R China

[2] Minist Agr, Key Lab Integrated Pest Management Fujian Taiwan, Fuzhou, Peoples R China

[3] BGI Shenzhen, Shenzhen, Peoples R China

[4] Univ Cambridge, Dept Zool, Cambridge, England

[5] Univ Adelaide, Sch Mol & Biomed Sci, Adelaide, SA, Australia

[6] Brock Univ, Dept Biol Sci, St Catharines, ON L2S 3A1, Canada

[7] Charles Sturt Univ, EH Graham Ctr, Orange, NSW, Australia

[8] Univ British Columbia, Dept Bot, Vancouver, BC, Canada

[9] Cornell Univ, New York State Agr Expt Stn, Dept Entomol, Geneva, NY 14456 USA

[10] Univ Arizona, Dept Entomol, Tucson, AZ 85721 USA

[11] Univ Edinburgh, Inst Evolutionary Biol, Edinburgh, Midlothian, Scotland

[12] Univ Toronto, Fac Forestry, Toronto, ON, Canada

[13] Kansas State Univ, USDA ARS, Manhattan, KS 66506 USA

[14] Kansas State Univ, Dept Entomol, Manhattan, KS 66506 USA

[15] Univ Copenhagen, Dept Biol, Copenhagen, Denmark

来源：

NATURE GENETICS | 2013年 / 45卷 / 02期

基金：

英国生物技术与生命科学研究理事会; 中国国家自然科学基金;

关键词：

DIAMONDBACK MOTH; PLUTELLA-XYLOSTELLA; GENE; SEQUENCE; RESISTANCE; LEPIDOPTERA; MECHANISMS; PREDICTION; EVOLUTION; ALIGNMENT;

D O I：

10.1038/ng.2524

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

How an insect evolves to become a successful herbivore is of profound biological and practical importance. Herbivores are often adapted to feed on a specific group of evolutionarily and biochemically related host plants(1), but the genetic and molecular bases for adaptation to plant defense compounds remain poorly understood(2). We report the first whole-genome sequence of a basal lepidopteran species, Plutella xylostella, which contains 18,071 protein-coding and 1,412 unique genes with an expansion of gene families associated with perception and the detoxification of plant defense compounds. A recent expansion of retrotransposons near detoxification-related genes and a wider system used in the metabolism of plant defense compounds are shown to also be involved in the development of insecticide resistance. This work shows the genetic and molecular bases for the evolutionary success of this worldwide herbivore and offers wider insights into insect adaptation to plant feeding, as well as opening avenues for more sustainable pest management.

引用

页码：220 / 225

页数：6

共 85 条

[1] The genome sequence of Drosophila melanogaster [J].

Adams, MD ;

Celniker, SE ;

Holt, RA ;

Evans, CA ;

Gocayne, JD ;

Amanatides, PG ;

Scherer, SE ;

Li, PW ;

Hoskins, RA ;

Galle, RF ;

George, RA ;

Lewis, SE ;

Richards, S ;

Ashburner, M ;

Henderson, SN ;

Sutton, GG ;

Wortman, JR ;

Yandell, MD ;

Zhang, Q ;

Chen, LX ;

Brandon, RC ;

Rogers, YHC ;

Blazej, RG ;

Champe, M ;

Pfeiffer, BD ;

Wan, KH ;

Doyle, C ;

Baxter, EG ;

Helt, G ;

Nelson, CR ;

Miklos, GLG ;

Abril, JF ;

Agbayani, A ;

An, HJ ;

Andrews-Pfannkoch, C ;

Baldwin, D ;

Ballew, RM ;

Basu, A ;

Baxendale, J ;

Bayraktaroglu, L ;

Beasley, EM ;

Beeson, KY ;

Benos, PV ;

Berman, BP ;

Bhandari, D ;

Bolshakov, S ;

Borkova, D ;

Botchan, MR ;

Bouck, J ;

Brokstein, P .

SCIENCE, 2000, 287 (5461) :2185-2195

[2] Specialist versus generalist insect herbivores and plant defense [J].

Ali, Jared G. ;

Agrawal, Anurag A. .

TRENDS IN PLANT SCIENCE, 2012, 17 (05) :293-302

[3] DDT-RESISTANCE IN PLUTELLA-MACULIPENNIS (CURT) (LEP) IN JAVA']JAVA [J].

ANKERSMIT, GW .

BULLETIN OF ENTOMOLOGICAL RESEARCH, 1953, 44 (03) :421-&

[4]

Apweiler R, 2004, NUCLEIC ACIDS RES, V32, pD115, DOI [10.1093/nar/gkh131, 10.1093/nar/gkw1099]

[5] Parallel Evolution of Bacillus thuringiensis Toxin Resistance in Lepidoptera [J].

Baxter, Simon W. ;

Badenes-Perez, Francisco R. ;

Morrison, Anna ;

Vogel, Heiko ;

Crickmore, Neil ;

Kain, Wendy ;

Wang, Ping ;

Heckel, David G. ;

Jiggins, Chris D. .

GENETICS, 2011, 189 (02) :675-U814

[6] Linkage Mapping and Comparative Genomics Using Next-Generation RAD Sequencing of a Non-Model Organism [J].

Baxter, Simon W. ;

Davey, John W. ;

Johnston, J. Spencer ;

Shelton, Anthony M. ;

Heckel, David G. ;

Jiggins, Chris D. ;

Blaxter, Mark L. .

PLOS ONE, 2011, 6 (04)

[7] Mis-Spliced Transcripts of Nicotinic Acetylcholine Receptor α6 Are Associated with Field Evolved Spinosad Resistance in Plutella xylostella (L.) [J].

Baxter, Simon W. ;

Chen, Mao ;

Dawson, Anna ;

Zhao, Jian-Zhou ;

Vogel, Heiko ;

Shelton, Anthony M. ;

Heckel, David G. ;

Jiggins, Chris D. .

PLOS GENETICS, 2010, 6 (01)

[8] Tandem repeats finder: a program to analyze DNA sequences [J].

Benson, G .

NUCLEIC ACIDS RESEARCH, 1999, 27 (02) :573-580

[9] GeneWise and genomewise [J].

Birney, E ;

Clamp, M ;

Durbin, R .

GENOME RESEARCH, 2004, 14 (05) :988-995

[10] Scaffolding pre-assembled contigs using SSPACE [J].

Boetzer, Marten ;

Henkel, Christiaan V. ;

Jansen, Hans J. ;

Butler, Derek ;

Pirovano, Walter .

BIOINFORMATICS, 2011, 27 (04) :578-579

← 1 2 3 4 5 6 7 8 9 →