Characterization of the complete chloroplast genome ofRumex nepalensis(Polygonaceae)

被引：2

作者：

Wu, Chun-Xia ^{[1
]}

Zhai, Cai-Cai ^{[1
]}

Fan, Shou-Jin ^{[1
]}

机构：

[1] Shandong Normal Univ, Coll Life Sci, Key Lab Plant Stress Res, Jinan, Shandong, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期

关键词：

Plastome; phylogeny; Rumex nepalensis;

D O I：

10.1080/23802359.2020.1778568

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Rumex nepalensis(Polygonaceae) is a fairly common perennial herb of high altitudes. In this study, we determined the complete chloroplast genome (plastome) ofR. nepalensiswith genome-skimming method. The complete plastome ofR. nepalensiswas 159,110 bp in length with a quadripartite structure, including a large single-copy region of 84,810 bp, a small single-copy region of 13,044 bp, and a pair of inverted repeats regions of 30,628 bp. The overall guanine-cytosine (GC) content was 37.5%. A total of 112 unique genes was annotated in this plastome, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes. In the ML tree,R. nepalensiswas sister toR. crispus, andRumexwas sister to a clade comprisingRheumandOxyriawithin Polygonaceae famliy.

引用

页码：2458 / 2459

页数：2

共 50 条

[41] The characteristics of the complete chloroplast genome for Eucalyptus robusta (Myrtaceae) [J].

Gao, Yisen ;

Zhang, Jiayi ;

Tang, Haining ;

Liu, Nuoyi ;

Li, Guiying ;

Yue, Daran .

MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12) :3517-3518

[42] The complete chloroplast genome sequence of Clintonia udensis (Liliaceae) [J].

Li, Jianfang ;

Xu, Bei ;

Yang, Qian ;

Liu, Zhan-Lin .

MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02) :3194-3195

[43] The complete chloroplast genome sequence of Limonium sinense (Plumbaginaceae) [J].

Li, Jianfang ;

Xu, Bei ;

Yang, Qian ;

Wang, Ting ;

Zhu, Qianyang ;

Lin, Yini ;

Liu, Zhan-Lin .

MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01) :556-557

[44] Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) [J].

Li, Jianfang ;

Liu, Zhan-Lin .

MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (05) :761-763

[45] Complete sequence of wild Physalis philadelphica chloroplast genome [J].

Sandoval-Padilla, Isaac ;

Perez-Alquicira, Jessica ;

del Pilar Zamora-Tavares, Maria ;

Rodriguez, Aaron ;

Cortes-Cruz, Moises ;

Alcala-Gomez, Gabriela ;

Vargas-Ponce, Ofelia .

MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02) :3295-3297

[46] The complete chloroplast genome of Phoebe zhennan [J].

Liu, Dan ;

Liu, Dingkun ;

Li, Minghe ;

Chen, Shipin .

MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1564-1565

[47] The complete chloroplast genome of Gentiana macrophylla [J].

Wang, Xiaofan ;

Yang, Na ;

Su, Jiao ;

Zhang, Hui ;

Cao, Xiaoyan .

MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02) :395-396

[48] The complete chloroplast genome of Actinidia fulvicoma [J].

Zhang, Fuquan ;

Yan, Zhihao ;

Xu, Yiqing ;

Lin, Haifeng .

MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02) :4089-4090

[49] The complete chloroplast genome of Syzygium acuminatissimum [J].

Zeng, Feng ;

Deng, Yanwen ;

Liu, Xiaozhou ;

Zhu, Xuanxi ;

Tan, Guangwen .

MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01) :127-128

[50] The complete chloroplast genome of Aristolochia kwangsiensi [J].

Zhou, Qiang ;

Li, Jingling ;

Jiang, Mei ;

Wang, Liqiang ;

Liu, Chang ;

Wang, Yuhua .

MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02) :1184-1185

← 1 2 3 4 5 →