miR-483 is a self-regulating microRNA and can activate its own expression via USF1 in HeLa cells

被引:13
作者
Emmerling, Verena Vanessa [1 ,4 ]
Fischer, Simon [2 ,3 ]
Kleemann, Michael [2 ]
Handrick, Rene [2 ]
Kochanek, Stefan [1 ]
Otte, Kerstin [2 ]
机构
[1] Univ Ulm, Dept Gene Therapy, Helmholtz Str 8-1, D-89081 Ulm, Germany
[2] Biberach Univ Appl Sci, Inst Appl Biotechnol, Hubertus Liebrecht Str 35, D-88400 Biberach, Germany
[3] Boehringer Ingelheim Pharma GmbH & Co KG, Early Stage Bioproc Dev, Birkendorfer Str 65, D-88400 Biberach, Germany
[4] Sartorius Stedim Cellca GmbH, Uhlmannstr 28, D-88471 Laupheim, Germany
关键词
microRNA; miR-483; Self-regulation; HeLa; Transcription factor; INTRONIC MIRNAS; HOST GENE; IGF2; IDENTIFICATION; PROMOTERS; STRESS;
D O I
10.1016/j.biocel.2016.09.022
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MicroRNAs (miRNAs) are small non-coding RNAs that constitute a fundamental part of post transcriptional gene regulation in mammalian cells. We have recently identified the intronic miR-483, which functions as an important regulator of protein synthesis during mild hypothermia in human and rodent cells. Since only very little is known about transcriptional regulation of intronic miRNAs and their host genes, we thoroughly investigated the regulation of miR-483 expression and its host gene IGF2 in HeLa cells. We demonstrate that miR-483 is regulated and expressed independently of its host gene IGF2 during mild hypothermia. Strikingly, we also discovered that miR-483 enhances its own transcription by up-regulation of the transcription factor USF1, which activates a promoter element upstream of the MIR483 gene. However, since the USF1 mRNA lacks binding sites for miR-483-5p and -3p, USF1 expression is likely enhanced in an indirect manner. Our results suggest that miR-483 may self-regulate its own expression independently of its host gene IGF2 in human HeLa cells. This points towards a novel feed-forward mechanism, in which selected intronic miRNAs may activate their own expression by transcriptional activation of upstream regulators. (C) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:81 / 86
页数:6
相关论文
共 32 条
[11]  
Hinske L. C., 2014, MIRIAD INTEGRATING M, V2014
[12]   A potential role for intragenic miRNAs on their hosts' interactome [J].
Hinske, Ludwig Christian G. ;
Galante, Pedro A. F. ;
Kuo, Winston P. ;
Ohno-Machado, Lucila .
BMC GENOMICS, 2010, 11
[13]   A Potential Regulatory Role for Intronic microRNA-338-3p for Its Host Gene Encoding Apoptosis-Associated Tyrosine Kinase [J].
Kos, Aron ;
Loohuis, Nikkie F. M. Olde ;
Wieczorek, Martha L. ;
Glennon, Jeffrey C. ;
Martens, Gerard J. M. ;
Kolk, Sharon M. ;
Aschrafi, Armaz .
PLOS ONE, 2012, 7 (02)
[14]   The widespread regulation of microRNA biogenesis, function and decay [J].
Krol, Jacek ;
Loedige, Inga ;
Filipowicz, Witold .
NATURE REVIEWS GENETICS, 2010, 11 (09) :597-610
[15]   Expression of intronic miRNAs and their host gene Igf2 in a murine unilateral ureteral obstruction model [J].
Li, N. Q. ;
Yang, J. ;
Cui, L. ;
Ma, N. ;
Zhang, L. ;
Hao, L. R. .
BRAZILIAN JOURNAL OF MEDICAL AND BIOLOGICAL RESEARCH, 2015, 48 (06) :486-492
[16]   Insulin-like growth factor-I (IGF-I) and clinical nutrition [J].
Livingstone, Callum .
CLINICAL SCIENCE, 2013, 125 (5-6) :265-280
[17]   Igf2-derived intronic miR-483 promotes mouse hepatocellular carcinoma cell proliferation [J].
Ma, Ning ;
Li, Fuyuan ;
Li, Dan ;
Hui, Yang ;
Wang, Xidi ;
Qiao, Yu ;
Zhang, Yanfen ;
Xiang, Ying ;
Zhou, Jianying ;
Zhou, Lingyun ;
Zheng, Xiaofei ;
Gao, Xu .
MOLECULAR AND CELLULAR BIOCHEMISTRY, 2012, 361 (1-2) :337-343
[18]   Coexpression of an intronic microRNA and its host gene reveals a potential role for miR-483-5p as an IGF2 partner [J].
Ma, Ning ;
Wang, Xidi ;
Qiao, Yu ;
Li, Fuyuan ;
Hui, Yang ;
Zou, Chaoxia ;
Jin, Jianfeng ;
Lv, Guixiang ;
Peng, Yahui ;
Wang, Lujing ;
Huang, Hui ;
Zhou, Lingyun ;
Zheng, Xiaofei ;
Gao, Xu .
MOLECULAR AND CELLULAR ENDOCRINOLOGY, 2011, 333 (01) :96-101
[19]   Structure and activity of putative intronic miRNA promoters [J].
Monteys, Alex Mas ;
Spengler, Ryan M. ;
Wan, Ji ;
Tecedor, Luis ;
Lennox, Kimberly A. ;
Xing, Yi ;
Davidson, Beverly L. .
RNA, 2010, 16 (03) :495-505
[20]   A conserved structural element in horse and mouse IGF2 genes binds a methylation sensitive factor [J].
Otte, K ;
Choudhury, D ;
Charalambous, M ;
Engström, W ;
Rozell, B .
NUCLEIC ACIDS RESEARCH, 1998, 26 (07) :1605-1612