GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research

被引：11229

作者：

Peakall, R ^{[1
]}

Smouse, PE

机构：

[1] Australian Natl Univ, Sch Bot & Zool, Canberra, ACT 0200, Australia

[2] Rutgers State Univ, Dept Ecol Evolut & Nat Resources, Cook Coll, New Brunswick, NJ 08901 USA

来源：

MOLECULAR ECOLOGY NOTES | 2006年 / 6卷 / 01期

关键词：

AMOVA; population genetic analysis; software; spatial autocorrelation; teaching; TWOGENER;

D O I：

10.1111/j.1471-8286.2005.01155.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

GENALEX is a user-friendly cross-platform package that runs within Microsoft Excel, enabling population genetic analyses of codominant, haploid and binary data. Allele frequency-based analyses include heterozygosity, F statistics, Nei's genetic distance, population assignment, probabilities of identity and pairwise relatedness. Distance-based calculations include AMOVA, principal coordinates analysis (PCA), Mantel tests, multivariate and 2D spatial autocorrelation and TWOGENER. More than 20 different graphs summarize data and aid exploration. Sequence and genotype data can be imported from automated sequencers, and exported to other software. Initially designed as tool for teaching, GENALEX 6 now offers features for researchers as well. Documentation and the program are available at http://www.anu.edu.au/BoZo/GenAlEx/

引用

页码：288 / 295

页数：8

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