High-Quality Genome Resource of Xanthomonas hyacinthi Generated via Long-Read Sequencing

被引：5
|
作者：
Cohen, Stephen P. [1 ]
Luna, Emily K. [2 ]
Lang, Jillian M. [2 ]
Ziegle, Janet [3 ]
Chang, Christine [3 ]
Leach, Jan E. [2 ]
Le-Saux, Marion Fischer [4 ,5 ]
Portier, Perrine [4 ,5 ]
Koebnik, Ralf [6 ]
Jacobs, Jonathan M. [1 ,7 ]
机构：
[1] Ohio State Univ, Dept Plant Pathol, Columbus, OH 43210 USA
[2] Colorado State Univ, Dept Bioagr Sci & Pest Management, Ft Collins, CO 80523 USA
[3] Pacific Biosci, Menlo Pk, CA 94025 USA
[4] Univ Angers, Inst Natl Rech Agron INRA, Agrocampus Ouest, IRHS,SFR 4207 QuaSav, F-49071 Beaucouze, France
[5] CIRM CFBP French Collect Plant Associated Bacteri, INRA ACO UA, IRHS, UMR 1345, 42 Rue Georges Morel, F-49070 Beaucouze, France
[6] Univ Montpellier, Ctr Cooperat Int Rech Agron Dev CIRAD, Inst Rech Dev IRD, IPME, F-34000 Montpellier, France
[7] Ohio State Univ, Infect Dis Inst, Columbus, OH 43210 USA
来源：
PLANT DISEASE | 2020年 / 104卷 / 04期
基金：
美国国家科学基金会; 美国农业部;
关键词：
hyacinth; SMRT sequencing; Xanthomonas hyacinthi; yellow disease; YELLOW DISEASE;
D O I：
10.1094/PDIS-11-19-2393-A
中图分类号：
Q94 [植物学];
学科分类号：
071001 ;
摘要：
The bacterial plant pathogen Xanthomonas hyacinthi is the causal agent of yellow disease of Hyacinthus and other ornamental plant genera. There is no available complete genome for X. hyacinthi, limiting basic research for this pathogen. Here, we release a high-quality complete genome sequence for the X. hyacinthi type strain, CFBP 1156. Single-molecule real-time (SMRT) sequencing with a mean coverage of 306x revealed two contigs of 4,918,645 and 44,381 bp in size. This was the first characterized plant-disease-causing species of Xanthomonas and this genome provides a resource to better understand the biology of yellow disease of hyacinth.
引用
收藏
页码：1011 / 1012
页数：2
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