Bacterial diversity dynamics of traditional Turkish Ezine Cheese as evaluated by PCR-DGGE and SSCP analysis

被引:8
作者
Sofu, Aytul [1 ]
Ekinci, Fatma Yesim [2 ]
机构
[1] Suleyman Demirel Univ, Dept Chem Engn, TR-32260 Isparta, Turkey
[2] Yeditepe Univ, Dept Food Engn, TR-34755 Istanbul, Turkey
关键词
Ezine cheese; PCR-DGGE; SSCP; Bacterial diversity; Lactic acid bacteria; 16S RIBOSOMAL-RNA; GEL-ELECTROPHORESIS ANALYSIS; LACTIC-ACID BACTERIA; TEMPORAL TEMPERATURE; MICROBIAL DYNAMICS; COMMUNITY DYNAMICS; FETA CHEESE; IDENTIFICATION; MICROFLORA; POPULATIONS;
D O I
10.1111/1471-0307.12311
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
The aim of this study was to evaluate the bacterial ecosystem of milk and Ezine cheese by PCR amplification of the V3 region of the bacterial 16S rRNA gene followed by denaturing gradient gel electrophoresis (DGGE) and by monitoring the bacterial diversity dynamics using PCR single-strand conformation polymorphism (SSCP) analysis. PCR-DGGE analysis revealed that 17 different bands and strains belonging to the Lactococcus lactis group and Streptococcus thermophilus were predominant during manufacturing and ripening. SSCP analysis revealed that the bacterial profiles of the two cheese samples were similar.
引用
收藏
页码:592 / 600
页数:9
相关论文
共 48 条
[31]   Microbiological characterization of artisanal Montasio cheese : analysis of its indigenous lactic acid bacteria [J].
Marino, M ;
Maifreni, M ;
Rondinini, G .
FEMS MICROBIOLOGY LETTERS, 2003, 229 (01) :133-140
[32]   Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing [J].
Masoud, Wafa ;
Takamiya, Monica ;
Vogensen, Finn K. ;
Lillevang, Soren ;
Abu Al-Soud, Waleed ;
Sorensen, Soren J. ;
Jakobsen, Mogens .
INTERNATIONAL DAIRY JOURNAL, 2011, 21 (03) :142-148
[33]   Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology [J].
Muyzer, G ;
Smalla, K .
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 1998, 73 (01) :127-141
[34]   PROFILING OF COMPLEX MICROBIAL-POPULATIONS BY DENATURING GRADIENT GEL-ELECTROPHORESIS ANALYSIS OF POLYMERASE CHAIN REACTION-AMPLIFIED GENES-CODING FOR 16S RIBOSOMAL-RNA [J].
MUYZER, G ;
DEWAAL, EC ;
UITTERLINDEN, AG .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (03) :695-700
[35]   Molecular fingerprinting of dairy microbial ecosystems by use of temporal temperature and denaturing gradient gel electrophoresis [J].
Ogier, JC ;
Lafarge, V ;
Girard, V ;
Rault, A ;
Maladen, V ;
Gruss, A ;
Leveau, JY ;
Delacroix-Buchet, A .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (09) :5628-5643
[36]   Identification of the bacterial microflora in dairy products by temporal temperature gradient gel electrophoresis [J].
Ogier, JC ;
Son, O ;
Gruss, A ;
Tailliez, P ;
Delacroix-Buchet, A .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (08) :3691-3701
[37]   Phenotypic and PCR-based characterization of the microflora in Norvegia cheese during ripening [J].
Ostlie, HM ;
Eliassen, L ;
Florvaag, A ;
Skeie, S .
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 2004, 94 (03) :287-299
[38]   RAPID EXTRACTION OF BACTERIAL GENOMIC DNA WITH GUANIDIUM THIOCYANATE [J].
PITCHER, DG ;
SAUNDERS, NA ;
OWEN, RJ .
LETTERS IN APPLIED MICROBIOLOGY, 1989, 8 (04) :151-156
[39]   Pecorino Crotonese cheese: Study of bacterial population and flavour compounds [J].
Randazzo, C. L. ;
Pitino, I. ;
Ribbera, A. ;
Caggia, C. .
FOOD MICROBIOLOGY, 2010, 27 (03) :363-374
[40]   Artisanal and experimental Pecorino Siciliano cheese: Microbial dynamics during manufacture assessed by culturing and PCR-DGGE analyses [J].
Randazzo, Cinzia L. ;
Vaughan, Elaine E. ;
Caggia, Cinzia .
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 2006, 109 (1-2) :1-8