Molecular karyotyping in clinical diagnosis

被引:2
作者
Rauch, A. [1 ]
机构
[1] Univ Erlangen Nurnberg, Inst Humangenet, D-91054 Erlangen, Germany
来源
MEDIZINISCHE GENETIK | 2008年 / 20卷 / 04期
关键词
Molecular karyotyping; Array CGH; SNP array; Mental retardation; Microdeletion syndromes;
D O I
10.1007/s11825-008-0135-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The term "molecular karyotyping" refers to the genome-wide analysis of copy number variations using arrays that cover the genome with genomic markers with varying density. Currently the main application is the investigation of patients with otherwise unexplained mental retardation and multiple congenital anomalies. Studies of such patients who remained without etiological diagnosis after conventional karyotyping, subtelomeric screening, and targeted molecular-cytogenetic studies for well-known microdeletion syndromes revealed chromosomal microaberrations in about 10% of cases and allowed the delineation of several new microdeletion and microduplication syndromes. Nevertheless, because of the large number of copy number polymorphisms, interpretation of unique findings needs thorough consideration.
引用
收藏
页码:386 / 394
页数:9
相关论文
共 36 条
[1]   Detection of low-level mosaicism by array CGH in routine diagnostic specimens [J].
Balliff, Blake C. ;
Rorem, Emily A. ;
Sundin, Kyle ;
Lincicum, Matt ;
Gaskin, Shannon ;
Coppinger, Justine ;
Kashork, Catherine D. ;
Shaffer, Lisa G. ;
Bejjani, Bassem A. .
AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2006, 140A (24) :2757-2767
[2]   Familial interstitial 570 kbp deletion of the UBE3A gene region causing Angelman syndrome but not Prader-Willi syndrome [J].
Bürger, J ;
Horn, D ;
Tönnies, H ;
Neitzel, H ;
Reis, A .
AMERICAN JOURNAL OF MEDICAL GENETICS, 2002, 111 (03) :233-237
[3]   Resolving the resolution of array CGH [J].
Coe, Bradley P. ;
Ylstra, Bauke ;
Carvalho, Beatriz ;
Meijer, Gerrit A. ;
MacAulay, Calum ;
Lam, Wan L. .
GENOMICS, 2007, 89 (05) :647-653
[4]   Cryptic deletions are a common finding in "balanced'' reciprocal and complex chromosome rearrangements: A study of 59 patients [J].
De Gregori, M. ;
Ciccone, R. ;
Magini, P. ;
Pramparo, T. ;
Gimelli, S. ;
Messa, J. ;
Novara, F. ;
Vetro, A. ;
Rossi, E. ;
Maraschio, P. ;
Bonaglia, M. C. ;
Anichini, C. ;
Ferrero, G. B. ;
Silengo, M. ;
Fazzi, E. ;
Zatterale, A. ;
Fischetto, R. ;
Previdere, C. ;
Belli, S. ;
Turci, A. ;
Calabrese, G. ;
Bernardi, F. ;
Meneghelli, E. ;
Riegel, M. ;
Rocchi, M. ;
Guerneri, S. ;
Lalatta, F. ;
Zelante, L. ;
Romano, C. ;
Fichera, Ma ;
Mattina, T. ;
Arrigo, G. ;
Zollino, M. ;
Giglio, S. ;
Lonardo, F. ;
Bonfante, A. ;
Ferlini, A. ;
Cifuentes, F. ;
Van Esch, H. ;
Backx, L. ;
Schinzel, A. ;
Vermeesch, J. R. ;
Zuffardi, O. .
JOURNAL OF MEDICAL GENETICS, 2007, 44 (12) :750-762
[5]   Diagnostic genome profiling in mental retardation [J].
de Vries, BBA ;
Pfundt, R ;
Leisink, M ;
Koolen, DA ;
Vissers, LELM ;
Janssen, IM ;
van Reijmersdal, S ;
Nillesen, WM ;
Huys, EHLPG ;
de Leeuw, N ;
Smeets, D ;
Sistermans, EA ;
Feuth, T ;
van Ravenswaaij-Arts, CMA ;
van Kessel, AG ;
Schoenmakers, EFPM ;
Brunner, HG ;
Veltman, JA .
AMERICAN JOURNAL OF HUMAN GENETICS, 2005, 77 (04) :606-616
[6]   Completing the map of human genetic variation [J].
Eichler, Evan E. ;
Nickerson, Deborah A. ;
Altshuler, David ;
Bowcock, Anne M. ;
Brooks, Lisa D. ;
Carter, Nigel P. ;
Church, Deanna M. ;
Felsenfeld, Adam ;
Guyer, Mark ;
Lee, Charles ;
Lupski, James R. ;
Mullikin, James C. ;
Pritchard, Jonathan K. ;
Sebat, Jonathan ;
Sherry, Stephen T. ;
Smith, Douglas ;
Valle, David ;
Waterston, Robert H. .
NATURE, 2007, 447 (7141) :161-165
[7]   The use of telomere probes to investigate submicroscopic rearrangements associated with mental retardation [J].
Flint, J ;
Knight, S .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2003, 13 (03) :310-316
[8]   Oligonucleotide microarray analysis of genomic imbalance in children with mental retardation [J].
Friedman, J. M. ;
Baross, Agnes ;
Delaney, Allen D. ;
Ally, Adrian ;
Arbour, Laura ;
Asano, Jennifer ;
Bailey, Dione K. ;
Barber, Sarah ;
Birch, Patricia ;
Brown-John, Mabel ;
Cao, Manqiu ;
Chan, Susanna ;
Charest, David L. ;
Farnoud, Noushin ;
Fernandes, Nicole ;
Flibotte, Stephane ;
Go, Anne ;
Gibson, William T. ;
Holt, Robert A. ;
Jones, Steven J. M. ;
Kennedy, Giulia C. ;
Krzywinski, Martin ;
Langlois, Sylvie ;
Li, Haiyan I. ;
McGillivray, Barbara C. ;
Nayar, Tarun ;
Pugh, Trevor J. ;
Rajcan-Separovic, Evica ;
Schein, Jacqueline E. ;
Schnerch, Angelique ;
Siddiqui, Asim ;
Van Allen, Margot I. ;
Wilson, Gary ;
Yong, Siu-Li ;
Zahir, Farah ;
Eydoux, Patrice ;
Marra, Marco A. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2006, 79 (03) :500-513
[9]  
GOHRING I, 2008, EUR J MED GENET 0812
[10]   Genome-wide copy number profiling on high-density bacterial artificial chromosomes, single-nucleotide polymorphisms, and oligonucleotide microarrays: A platform comparison based on statistical power analysis [J].
Hehir-Kwa, Jayne Y. ;
Egmont-Petersen, Michael ;
Janssen, Irene M. ;
Smeets, Dominique ;
Van Kessel, Ad Geurts ;
Veltman, Joris A. .
DNA RESEARCH, 2007, 14 (01) :1-11