Shaping the landscape: mechanistic consequences of ubiquitin modification of chromatin

被引:40
作者
Braun, Sigurd [1 ,2 ]
Madhani, Hiten D. [1 ]
机构
[1] Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USA
[2] Univ Munich, Butenandt Inst Physiol Chem, D-81377 Munich, Germany
基金
美国国家卫生研究院;
关键词
protein degradation; heterochromatin; histone methylation; monoubiquitylation; ubiquitin ligase; RNA-POLYMERASE-II; HISTONE H2B MONOUBIQUITINATION; GENE-EXPRESSION; FISSION YEAST; TRANSCRIPTIONAL ACTIVATION; SCHIZOSACCHAROMYCES-POMBE; HETEROCHROMATIN FORMATION; H3; METHYLATION; DNA-DAMAGE; S PHASE;
D O I
10.1038/embor.2012.78
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The organization of eukaryotic chromosomes into transcriptionally active euchromatin and repressed heterochromatin requires mechanisms-that establish, maintain and distinguish these canonical-chromatin domains. Post-translational modifications are funda-mental in these processes. Monoubiquitylation of histones was discovered more than three decades ago, but its precise function has been enigmatic until recently. It is now appreciated that the spectrum of chromatin ubiquitylation is not restricted to mono-ubiquitylation of histones, but includes degradatory ubiquitylation of histones, histone-modifying enzymes and non-histone chromatin factors. These occur in a spatially and temporally controlled manner. In this review, we summarize our understanding of these mechanisms with a particular emphasis on how ubiquitylation shapes the physical landscape of chromatin.
引用
收藏
页码:619 / 630
页数:12
相关论文
共 85 条
  • [1] CRL4Cdt2 Regulates Cell Proliferation and Histone Gene Expression by Targeting PR-Set7/Set8 for Degradation
    Abbas, Tarek
    Shibata, Etsuko
    Park, Jonghoon
    Jha, Sudhakar
    Karnani, Neerja
    Dutta, Anindya
    [J]. MOLECULAR CELL, 2010, 40 (01) : 9 - 21
  • [2] Msc1 acts through histone H2A.Z to promote chromosome stability in Schizosaccharomyces pombe
    Ahmed, Shakil
    Dul, Barbara
    Qiu, Xinxing
    Walworth, Nancy C.
    [J]. GENETICS, 2007, 177 (03) : 1487 - 1497
  • [3] UBR2 mediates transcriptional silencing during spermatogenesis via histone ubiquitination
    An, Jee Young
    Kim, Eun-A.
    Jiang, Yonghua
    Zakrzewska, Adriana
    Kim, Dong Eun
    Lee, Min Jae
    Mook-Jung, Inhee
    Zhang, Yi
    Kwon, Yong Tae
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (05) : 1912 - 1917
  • [4] The Polycomb-associated protein Rybp is a ubiquitin binding protein
    Arrigoni, Rachele
    Alam, Steven L.
    Wamstad, Joseph A.
    Bardwell, Vivian J.
    Sundquist, Wesley I.
    Schreiber-Agus, Nicole
    [J]. FEBS LETTERS, 2006, 580 (26) : 6233 - 6241
  • [5] Genome-wide function of H2B ubiquitylation in promoter and genic regions
    Batta, Kiran
    Zhang, Zhenhai
    Yen, Kuangyu
    Goffman, David B.
    Pugh, B. Franklin
    [J]. GENES & DEVELOPMENT, 2011, 25 (21) : 2254 - 2265
  • [6] The Cul4-Ddb1Cdt2 Ubiquitin Ligase Inhibits Invasion of a Boundary-Associated Antisilencing Factor into Heterochromatin
    Braun, Sigurd
    Garcia, Jennifer F.
    Rowley, Margot
    Rougemaille, Mathieu
    Shankar, Smita
    Madhani, Hiten D.
    [J]. CELL, 2011, 144 (01) : 41 - 54
  • [7] Gene silencing -: Trans-histone regulatory pathway in chromatin
    Briggs, SD
    Xiao, TJ
    Sun, ZW
    Caldwell, JA
    Shabanowitz, J
    Hunt, DF
    Allis, CD
    Strahl, BD
    [J]. NATURE, 2002, 418 (6897) : 498 - 498
  • [8] The Schizosaccharomyces pombe JmjC-Protein, Msc1, Prevents H2A.Z Localization in Centromeric and Subtelomeric Chromatin Domains
    Buchanan, Luke
    Durand-Dubief, Mickael
    Roguev, Assen
    Sakalar, Cagri
    Wilhelm, Brian
    Stralfors, Annelie
    Shevchenko, Anna
    Aasland, Rein
    Shevchenko, Andrej
    Ekwall, Karl
    Stewart, A. Francis
    [J]. PLOS GENETICS, 2009, 5 (11)
  • [9] Drosophila Stem Cells Share a Common Requirement for the Histone H2B Ubiquitin Protease Scrawny
    Buszczak, Michael
    Paterno, Shelley
    Spradling, Allan C.
    [J]. SCIENCE, 2009, 323 (5911) : 248 - 251
  • [10] CRL4Cdt2-Mediated Destruction of the Histone Methyltransferase Set8 Prevents Premature Chromatin Compaction in S Phase
    Centore, Richard C.
    Havens, Courtney G.
    Manning, Amity L.
    Li, Ju-Mei
    Flynn, Rachel Litman
    Tse, Alice
    Jin, Jianping
    Dyson, Nicholas J.
    Walter, Johannes C.
    Zou, Lee
    [J]. MOLECULAR CELL, 2010, 40 (01) : 22 - 33