Combined interaction of multi-locus genetic polymorphisms in cytarabine arabinoside metabolic pathway on clinical outcomes in adult acute myeloid leukaemia (AML) patients

被引:24
作者
Kim, Kyung Im [1 ]
Huh, Ik-Soo [2 ]
Kim, In-Wha [1 ,3 ]
Park, Taesung [2 ]
Ahn, Kwang-Sung [4 ]
Yoon, Sung-Soo [4 ,5 ,6 ]
Yoon, Jeong-Hyun [7 ]
Oh, Jung Mi [1 ,3 ]
机构
[1] Seoul Natl Univ, Coll Pharm, Seoul 151742, South Korea
[2] Seoul Natl Univ, Dept Stat, Seoul 151742, South Korea
[3] Seoul Natl Univ, Pharmaceut Sci Res Inst, Seoul 151742, South Korea
[4] Seoul Natl Univ Hosp, Clin Res Inst, Seoul 110744, South Korea
[5] Seoul Natl Univ, Coll Med, Dept Internal Med, Seoul 151742, South Korea
[6] Seoul Natl Univ, Canc Res Inst, Seoul 151742, South Korea
[7] Pusan Natl Univ, Coll Pharm, Pusan, South Korea
关键词
Acute myeloid leukaemia; Single nucleotide polymorphism; SNP-SNP interaction; Cytarabine; Response; Ethnicity; SINGLE-NUCLEOTIDE POLYMORPHISM; ARA-C SENSITIVITY; DEOXYCYTIDINE KINASE; CYTOSINE-ARABINOSIDE; 1-BETA-D-ARABINOFURANOSYLCYTOSINE; THYMIDINE; EXPRESSION; SURVIVAL; THERAPY; CELLS;
D O I
10.1016/j.ejca.2012.07.022
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Cytarabine arabinoside (ara-C) is the key agent for treating acute myeloid leukaemia (AML). Here, we genotyped 139 single nucleotide polymorphisms (SNPs) within the araC transport and metabolic pathway using the Illumina Golden Gate Assay in 97 patients with previously non-treated de novo AML other than M3. DCK rs4694362 (CC genotype) was a significant poor prognostic factor for overall survival (OS) (hazard ratio [HR], 33.202 [95% confidence interval (CI), 4.937-223.273], P < 0.0001, P-Bonferroni = 0.017). SLC29A1 rs3734703 (AA or AC genotype) in combination with TYMS rs2612100 (AA genotype) was significantly associated with shorter relapse free survival (RFS) (HR, 17.630 [95% CI, 4.829-64.369], P < 0.0001, P-Bonferroni = 0.021). These SNPs showed moderate or large inter-ethnic divergence in allele frequencies from African or Caucasian populations. The results of our study suggest that a single SNP and SNP-SNP interactions may help to predict the drug response and provide a guide in developing individualised chemotherapy for AML patients receiving ara-C based chemotherapy. (C) 2012 Elsevier Ltd. All rights reserved.
引用
收藏
页码:403 / 410
页数:8
相关论文
共 31 条
[1]  
[Anonymous], 1978, VARIABILITY NATURAL
[2]  
[Anonymous], 2012, CANC THER EV PROGR C
[3]   Ethnicity and survival in childhood acute myeloid leukemia: a report from the Children's Oncology Group [J].
Aplenc, R ;
Alonzo, TA ;
Gerbing, RB ;
Smith, FO ;
Meshinchi, S ;
Ross, JA ;
Perentesis, J ;
Woods, WG ;
Lange, BJ ;
Davies, SM .
BLOOD, 2006, 108 (01) :74-80
[4]   Influence of Friedreich ataxia GAA noncoding repeat expansions on pre-mRNA processing [J].
Baralle, Marco ;
Pastor, Tibor ;
Bussani, Erica ;
Pagani, Franco .
AMERICAN JOURNAL OF HUMAN GENETICS, 2008, 83 (01) :77-88
[5]   Cytidine deaminase genotype and toxicity of cytosine arabinoside therapy in children with acute myeloid leukemia [J].
Bhatla, Deepika ;
Gerbing, Robert B. ;
Alonzo, Todd A. ;
Conner, Heather ;
Ross, Julie A. ;
Meshinchi, Soheil ;
Zhai, Xiaowen ;
Zamzow, Tiffany ;
Mehta, Parinda A. ;
Geiger, Hartmut ;
Perentesis, John ;
Davies, Stella M. .
BRITISH JOURNAL OF HAEMATOLOGY, 2009, 144 (03) :388-394
[6]  
DANHAUSER LL, 1980, CANCER RES, V40, P1274
[7]   Diagnosis and management of acute myeloid leukemia in adults: recommendations from an international expert panel, on behalf of the European LeukemiaNet [J].
Doehner, Hartmut ;
Estey, Elihu H. ;
Amadori, Sergio ;
Appelbaum, Frederick R. ;
Buechner, Thomas ;
Burnett, Alan K. ;
Dombret, Herve ;
Fenaux, Pierre ;
Grimwade, David ;
Larson, Richard A. ;
Lo-Coco, Francesco ;
Naoe, Tomoki ;
Niederwieser, Dietger ;
Ossenkoppele, Gert J. ;
Sanz, Miguel A. ;
Sierra, Jorge ;
Tallman, Martin S. ;
Loewenberg, Bob ;
Bloomfield, Clara D. .
BLOOD, 2010, 115 (03) :453-474
[8]   Acute myeloid leukaemia [J].
Estey, Elihu ;
Doehner, Hartmut .
LANCET, 2006, 368 (9550) :1894-1907
[9]  
FRAM R, 1983, CANCER CHEMOTH PHARM, V11, P43
[10]   Deoxycytidine kinase and cN-II nucleotidase expression in blast cells predict survival in acute myeloid leukaemia patients treated with cytarabine [J].
Galmarini, CM ;
Thomas, X ;
Graham, K ;
El Jafaari, A ;
Cros, E ;
Jordheim, L ;
Mackey, JR ;
Dumontet, C .
BRITISH JOURNAL OF HAEMATOLOGY, 2003, 122 (01) :53-60