ZMAT2in Humans and Other Primates: A Highly Conserved and Understudied Gene

被引:3
作者
Baral, Kabita [1 ,2 ]
Rotwein, Peter [3 ]
机构
[1] Univ Texas El Paso, Coll Sci, Grad Sch, El Paso, TX 79968 USA
[2] Univ Calgary, Dept Microbiol, Calgary, AB, Canada
[3] Texas Tech Univ, Hlth Sci Ctr El Paso, Paul L Foster Sch Med, Dept Mol & Translat Med, El Paso, TX 79905 USA
来源
EVOLUTIONARY BIOINFORMATICS | 2020年 / 16卷
基金
美国国家卫生研究院;
关键词
ZMAT2; gene structure; gene evolution; genome analysis; GENOME; POPULATION; INSIGHTS; ELEMENTS; TARGETS; CELL;
D O I
10.1177/1176934320941500
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Recent advances in genetics present unique opportunities for enhancing our understanding of human physiology and disease predisposition through detailed analysis of gene structure, expression, and population variation via examination of data in publicly accessible genome and gene expression repositories. Yet, the vast majority of human genes remain understudied. Here, we show the scope of these genomic and genetic resources by evaluatingZMAT2, a member of a 5-gene family that through May 2020 had been the focus of only 4 peer-reviewed scientific publications. Using analysis of information extracted from public databases, we show that humanZMAT2is a 6-exon gene and find that it exhibits minimal genetic variation in human populations and in disease states, including cancer. We further demonstrate that the gene and its encoded protein are highly conserved among nonhuman primates and define a cohort ofZMAT2pseudogenes in the marmoset genome. Collectively, our investigations illustrate how complementary use of genomic, gene expression, and population genetic resources can lead to new insights about human and mammalian biology and evolution, and when coupled with data supporting key roles for ZMAT2 in keratinocyte differentiation and pre-RNA splicing argue that this gene is worthy of further study.
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页数:16
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