Detection of chromosomal blaCTX-M-15 in Escherichia coli O25b-B2-ST131 isolates from the Kinki region of Japan

被引:41
作者
Hirai, Itaru [1 ,2 ]
Fukui, Naoki [1 ]
Taguchi, Masumi [3 ]
Yamauchi, Kou [1 ]
Nakamura, Tatsuya [4 ]
Okano, Sho [5 ]
Yamamoto, Yoshimasa [1 ,3 ]
机构
[1] Osaka Univ, Grad Sch Med, Dept Biomed Informat, Suita, Osaka 5650871, Japan
[2] Univ Ryukyus, Fac Med, Sch Hlth Sci, Microbiol Lab, Nishihara, Okinawa 9030215, Japan
[3] Osaka Prefectural Inst Publ Hlth, Higashinari Ku, Osaka 5370025, Japan
[4] Kansai Med Univ, Kansai Med Univ Hirakata Hosp, Hirakata, Osaka 5731191, Japan
[5] Okinawa Prefectural Inst Hlth & Environm, Dept Biol Sci, Nanjo, Okinawa 9011202, Japan
基金
日本科学技术振兴机构;
关键词
CTX-M-type extended-spectrum; beta-lactamase; ESBL; Escherichia coli O25b B2 ST131; Chromosomal location; bla(CTX-M-15); BETA-LACTAMASE GENE; MOBILIZATION; SALMONELLA; RECOMBINATION; ENVIRONMENT; INTEGRATION; EXPRESSION; SEQUENCES; PLASMIDS;
D O I
10.1016/j.ijantimicag.2013.08.005
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Escherichia coli O25b-B2-ST131 isolates harbouring bla(CTX) (M) (15) are distributed worldwide. The bla(CTX) (M) (15) transposition unit has often been found on plasmids and the genetic contexts have been examined; however, less is known about the frequency and contexts of the bla(CTX-M-15) transposition unit on the chromosome. This study was performed to determine the chromosomal location of the bla(CTX-M-15) transposition unit and to analyse the molecular structure of the region surrounding the bla(CTX-M-15) transposition unit in E. coli O25b-B2-ST131 isolates. Twenty-two E. coli O25b-B2-ST131 strains harbouring bla(CTX-M-15) that had been isolated from university hospital patients and nursing home residents in the Kinki region of Japan were examined. Inverse PCR (iPCR) targeting bla(CTX-M-15) was performed to classify the molecular structure of the region surrounding the bla(CTX-M-15) transposition unit. The isolates were classified into nine types (types A-I) considering the iPCR results; type A was the most prevalent type (13/22 isolates). Sequences of the iPCR-amplified DNA fragments showed that the bla(CTX-M-15) transposition unit consisted of ISEcp1, bla(CTX-M-15) and orf477 Delta. A homology search of the obtained sequences showed that the bla(CTX-M-15) transposition unit was inserted into different chromosomal regions in eight of the nine classified types. Although 21 of the 22 E. coli isolates possessed chromosomally located bla(CTX-M-15) transposition units, clonal spread was not evident on pulsed-field gel electrophoresis (PFGE) analysis. Taken together, these data indicate that certain E. coli O25b-B2-ST131 strains harbouring chromosomal bla(CTX-M-15) have emerged and spread in the Kinki region of Japan. (C) 2013 Elsevier B.V. and the International Society of Chemotherapy. All rights reserved.
引用
收藏
页码:500 / 506
页数:7
相关论文
共 30 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]   Functional characterization of IS1999, an IS4 family element involved in mobilization and expression of β-lactam resistance genes [J].
Aubert, Daniel ;
Naas, Thierry ;
Heritier, Claire ;
Poirel, Laurent ;
Nordmann, Patrice .
JOURNAL OF BACTERIOLOGY, 2006, 188 (18) :6506-6514
[3]   Genome of Multidrug-Resistant Uropathogenic Escherichia coli Strain NA114 from India [J].
Avasthi, Tiruvayipati Suma ;
Kumar, Narender ;
Baddam, Ramani ;
Hussain, Arif ;
Nandanwar, Nishant ;
Jadhav, Savita ;
Ahmed, Niyaz .
JOURNAL OF BACTERIOLOGY, 2011, 193 (16) :4272-4273
[4]   CTX-M enzymes: origin and diffusion [J].
Canton, Rafael ;
Maria Gonzlez-Alba, Jose ;
Carlos Galan, Juan .
FRONTIERS IN MICROBIOLOGY, 2012, 3
[5]   Rapid and simple determination of the Escherichia coli phylogenetic group [J].
Clermont, O ;
Bonacorsi, S ;
Bingen, E .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (10) :4555-4558
[6]   The CTX-M-15-producing Escherichia coli diffusing clone belongs to a highly virulent B2 phylogenetic subgroup [J].
Clermont, Olivier ;
Lavollay, Marie ;
Vimont, Sophie ;
Deschamps, Catherine ;
Forestier, Christiane ;
Branger, Catherine ;
Denamur, Erick ;
Arlet, Guillaume .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2008, 61 (05) :1024-1028
[7]   Determination of Escherichia coli O types by allele-specific polymerase chain reaction:: application to the O types involved in human septicemia [J].
Clermont, Olivier ;
Johnson, James R. ;
Menard, Megan ;
Denamur, Erick .
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2007, 57 (02) :129-136
[8]   Characterisation of the CTX-M-15-encoding gene in Klebsiella pneumoniae strains from the Barcelona metropolitan area: plasmid diversity and chromosomal integration [J].
Coelho, Alicia ;
Jose Gonzalez-Lopez, Juan ;
Miro, Elisenda ;
Alonso-Tarres, Carles ;
Mirelis, Beatriz ;
Nieves Larrosa, Maria ;
Maria Bartolome, Rosa ;
Andreu, Antonia ;
Navarro, Ferran ;
Johnson, James R. ;
Prats, Guillem .
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 2010, 36 (01) :73-78
[9]   Variation in the genetic environments of blaCTX-M-15 in Escherichia coli from the faeces of travellers returning to the United Kingdom [J].
Dhanji, Hiran ;
Patel, Rajesh ;
Wall, Robert ;
Doumith, Michel ;
Patel, Bharat ;
Hope, Russell ;
Livermore, David M. ;
Woodford, Neil .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2011, 66 (05) :1005-1012
[10]   DNA sequence analysis of the genetic environment of various blaCTX-M genes [J].
Eckert, C ;
Gautier, V ;
Arlet, G .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2006, 57 (01) :14-23