The structures of type I polyketide synthases

被引:261
作者
Keatinge-Clay, Adrian T. [1 ]
机构
[1] Univ Texas Austin, Dept Chem & Biochem, Austin, TX 78712 USA
关键词
FATTY-ACID SYNTHASE; 6-DEOXYERYTHRONOLIDE B SYNTHASE; CARRIER PROTEIN TRANSACYLASE; PEROXISOMAL MULTIFUNCTIONAL ENZYME; SECONDARY-METABOLITE BIOSYNTHESIS; CYANOBACTERIUM LYNGBYA-MAJUSCULA; ISOLATED KETOREDUCTASE DOMAINS; BETA-KETOACYL SYNTHASE; ACTIVE-SITE OCCUPANCY; CRYSTAL-STRUCTURE;
D O I
10.1039/c2np20019h
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
With the recent structural characterization of each of the component enzymes of type I polyketide synthases, scientists are coming tantalizingly close to elucidating the overall architectures and mechanisms of these enormous molecular factories. This review highlights not only what has been revealed about the structures and activities of each of the domains but also the mysteries that remain to be solved.
引用
收藏
页码:1050 / 1073
页数:24
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共 138 条
[1]   Structural basis for macrolactonization by the pikromycin thioesterase [J].
Akey, David L. ;
Kittendorf, Jeffrey D. ;
Giraldes, John W. ;
Fecik, Robert A. ;
Sherman, David H. ;
Smith, Janet L. .
NATURE CHEMICAL BIOLOGY, 2006, 2 (10) :537-542
[2]   Crystal Structures of Dehydratase Domains from the Curacin Polyketide Biosynthetic Pathway [J].
Akey, David L. ;
Razelun, Jamie R. ;
Tehranisa, Jason ;
Sherman, David H. ;
Gerwick, William H. ;
Smith, Janet L. .
STRUCTURE, 2010, 18 (01) :94-105
[3]   Solution structure and proposed domain-domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase [J].
Alekseyev, Viktor Y. ;
Liu, Corey W. ;
Cane, David E. ;
Puglisi, Joseph D. ;
Khosla, Chaitan .
PROTEIN SCIENCE, 2007, 16 (10) :2093-2107
[4]   Crystal structure and biochemical studies of the trans-acting polyketide enoyl reductase LovC from lovastatin biosynthesis [J].
Ames, Brian D. ;
Chi Nguyen ;
Bruegger, Joel ;
Smith, Peter ;
Xu, Wei ;
Ma, Suzanne ;
Wong, Emily ;
Wong, Steven ;
Xie, Xinkai ;
Li, Jesse W. -H. ;
Vederas, John C. ;
Tang, Yi ;
Tsai, Shiou-Chuan .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (28) :11144-11149
[5]   Modeling holo-ACP:DH and holo-ACP:KR complexes of modular polyketide synthases: a docking and molecular dynamics study [J].
Anand, Swadha ;
Mohanty, Debasisa .
BMC STRUCTURAL BIOLOGY, 2012, 12
[6]   SBSPKS: structure based sequence analysis of polyketide synthases [J].
Anand, Swadha ;
Prasad, M. V. R. ;
Yadav, Gitanjali ;
Kumar, Narendra ;
Shehara, Jyoti ;
Ansari, Md. Zeeshan ;
Mohanty, Debasisa .
NUCLEIC ACIDS RESEARCH, 2010, 38 :W487-W496
[7]   Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins [J].
Artsimovitch, I ;
Vassylyeva, MN ;
Svetlov, D ;
Svetlov, V ;
Perederina, A ;
Igarashi, N ;
Matsugaki, N ;
Wakatsuki, S ;
Tahirov, TH ;
Vassylyev, DG .
CELL, 2005, 122 (03) :351-363
[8]   Directed mutagenesis alters the stereochemistry of catalysis by isolated ketoreductase domains from the erythromycin polyketide synthase [J].
Baerga-Ortiz, A ;
Popovic, B ;
Siskos, AP ;
O'Hare, HM ;
Spiteller, D ;
Williams, MG ;
Campillo, N ;
Spencer, JB ;
Leadlay, PF .
CHEMISTRY & BIOLOGY, 2006, 13 (03) :277-285
[9]   Acyl-CoA Subunit Selectivity in the Pikromycin Polyketide Synthase PikAIV: Steady-State Kinetics and Active-Site Occupancy Analysis by FTICR-MS [J].
Bonnett, Shilah A. ;
Rath, Christopher M. ;
Shareef, Abdur-Rafay ;
Joels, Joanna R. ;
Chemler, Joseph A. ;
Hakansson, Kristina ;
Reynolds, Kevin ;
Sherman, David H. .
CHEMISTRY & BIOLOGY, 2011, 18 (09) :1075-1081
[10]   Improved Antifungal Polyene Macrolides via Engineering of the Nystatin Biosynthetic Genes in Streptomyces noursei [J].
Brautaset, Trygve ;
Sletta, Havard ;
Nedal, Aina ;
Borgos, Sven Even F. ;
Degnes, Kristin F. ;
Bakke, Ingrid ;
Volokhan, Olga ;
Sekurova, Olga N. ;
Treshalin, Ivan D. ;
Mirchink, Elena P. ;
Dikiy, Alexander ;
Ellingsen, Trond E. ;
Zotchev, Sergey B. .
CHEMISTRY & BIOLOGY, 2008, 15 (11) :1198-1206