Species boundaries in the Himantura uarnak species complex (Myliobatiformes: Dasyatidae)

被引:28
作者
Arlyza, I. S. [1 ,3 ]
Shen, K-N [2 ]
Solihin, D. D. [3 ]
Soedharma, D. [3 ]
Berrebi, P. [4 ]
Borsa, P. [5 ]
机构
[1] Pusat Penelitian Oseanog P2O, Lembaga Ilmu Pengetahuan Indonesia LIPI, Jakarta, Indonesia
[2] Natl Taiwan Ocean Univ, Dept Environm Biol & Fisheries Sci, Keelung, Taiwan
[3] Inst Pertanian Bogor, Bogor, Indonesia
[4] Univ Montpellier 2, Inst Sci Revolut Montpellier ISE M, UMR UM2 CNRS IRD 5554, Montpellier, France
[5] Inst Rech Dev IRD, UR Biocomplexite Ecosyst Recifaux 227, Montpellier, France
关键词
Intron-size polymorphism; Cytochrome oxidase I; Cytochrome b; Himantura leoparda; Cryptic species; Taxonomy; SHARKS; CHONDRICHTHYANS; CONSERVATION; MANAGEMENT; FISHERIES; BARCODE; RAYS;
D O I
10.1016/j.ympev.2012.09.023
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Samples of the 'Himantura uarnak' species complex (H. leoparda, H. uarnak, H. undulata under their current definitions), mostly from the Coral Triangle, were analyzed using nuclear makers and mitochondrial DNA sequences. Genotypes at five intron loci showed four reproductively isolated clusters of individuals. The CO! sequences showed four major mitochondrial lineages, each diagnostic of a cluster as defined by nuclear markers. No mitochondrial introgression was detected. The average Kimura-2 parameter nucleotide distance separating clades was 0.061-0.120 (net: 0.055-0.114), while the distance separating individuals within a clade was 0.002-0.008. Additional, partial cytochrome-b gene sequences were used to link these samples with previously published sequences of reference specimens of the three nominal species. One of the clusters was identified as H. undulata and another one, as H. uarnak, while two cryptic species were uncovered within the recently-described H. leoparda, challenging the current morphology-based taxonomy of species within the H. uarnak species complex. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:429 / 435
页数:7
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