A comparative study of qualitative and quantitative models used to interpret complex STR DNA profiles

被引:25
作者
Bleka, Oyvind [1 ,2 ]
Benschop, Corina C. G. [3 ]
Storvik, Geir [2 ]
Gill, Peter [1 ,4 ]
机构
[1] Norwegian Inst Publ Hlth, Dept Forens Biol, Oslo, Norway
[2] Univ Oslo, Dept Math, Oslo, Norway
[3] Netherlands Forens Inst, Div Biol Traces, The Hague, Netherlands
[4] Univ Oslo, Dept Forens Med, Oslo, Norway
关键词
NGM STR DNA; Comparison study; Weight-of-evidence; Deconvolution; LIKELIHOOD RATIOS; DROP-OUT; CONTRIBUTORS; MIXTURE; VALIDATION; NUMBER; TOOL;
D O I
10.1016/j.fsigen.2016.07.016
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The investigation of the performance of models to interpret complex DNA profiles is best undertaken using real DNA profiles. Here we used a data set to reflect the variety typically encountered in real casework. The "crime-stains'' were constructed from known individuals and comprised a total of 59 diverse samples: pristine DNA/DNA extracted from blood, 2-3 person mixtures, degradation/no-degradation, differences in allele sharing, dropout/no dropout, etc. Two siblings were also included in the test-set in order to challenge the systems. Two kinds of analyses were performed, namely tests on whether a person of interest is a contributor based on weight-of-evidence (likelihood ratio) calculations, and deconvolution test to estimate the profile of unknown constituent parts. The weight-of-evidence analyses compared LRmix Studio with EuroForMix including exploration of the effect of applying an ad hoc stutter-filter. For the deconvolution analysis we compared EuroForMix with LoCIM-tool. When we classified persons of interests into being true contributors or non-contributors, we found that EuroForMix, overall, returned a higher true positive rate for the same false positive levels compared to LRmix. In particular, in cases with an unknown major component, EuroForMix was more discriminating for mixtures where the person of interest was a minor contributor. Comparing deconvolution of major contributors we found that EuroForMix overall performed better than LoCIM-tool. (C) 2016 Elsevier Ireland Ltd. All rights reserved.
引用
收藏
页码:85 / 96
页数:12
相关论文
共 31 条
[1]  
Balding D., 2016, LIKELTD TOOLS EVALUA
[2]   Evaluation of mixed-source, low-template DNA profiles in forensic science [J].
Balding, David J. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (30) :12241-12246
[3]   DNA PROFILE MATCH PROBABILITY CALCULATION - HOW TO ALLOW FOR POPULATION STRATIFICATION, RELATEDNESS, DATABASE SELECTION AND SINGLE BANDS [J].
BALDING, DJ ;
NICHOLS, RA .
FORENSIC SCIENCE INTERNATIONAL, 1994, 64 (2-3) :125-140
[4]   The effect of varying the number of contributors on likelihood ratios for complex DNA mixtures [J].
Benschop, Corina C. G. ;
Haned, Hinda ;
Jeurissen, Loes ;
Gill, Peter D. ;
Sijen, Titia .
FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2015, 19 :92-99
[5]   LoCIM-tool: An expert's assistant for inferring the major contributor's alleles in mixed consensus DNA profiles [J].
Benschop, Corina C. G. ;
Sijen, Titia .
FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2014, 11 :154-165
[6]   EuroForMix: An open source software based on a continuous model to evaluate STR DNA profiles from a mixture of contributors with artefacts [J].
Bleka, Oyvind ;
Storvik, Geir ;
Gill, Peter .
FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2016, 21 :35-44
[7]   Searching mixed DNA profiles directly against profile databases [J].
Bright, Jo-Anne ;
Taylor, Duncan ;
Curran, James ;
Buckleton, John .
FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2014, 9 :102-110
[8]   Analysis of forensic DNA mixtures with artefacts [J].
Cowell, R. G. ;
Graversen, T. ;
Lauritzen, S. L. ;
Mortera, J. .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES C-APPLIED STATISTICS, 2015, 64 (01) :1-48
[9]   Interpretation of repeat measurement DNA evidence allowing for multiple contributors and population substructure [J].
Curran, JM ;
Gill, P ;
Bill, MR .
FORENSIC SCIENCE INTERNATIONAL, 2005, 148 (01) :47-53
[10]   Characterisation of forward stutter in the AmpF/STR® SGM Plus® PCR [J].
Gibb, Andrew J. ;
Huell, Andrea-Louise ;
Simmons, Mark C. ;
Brown, Rosalind M. .
SCIENCE & JUSTICE, 2009, 49 (01) :24-31