Molecular characterizations of two grapevine rupestris stem pitting-associated virus isolates from China

被引：17

作者：

Hu, Guo-Jun ^{[1
]}

Dong, Ya-Feng ^{[1
]}

Zhu, Hong-Juan ^{[1
]}

Zhang, Zun-Ping ^{[1
]}

Fan, Xu-Dong ^{[1
]}

Ren, Fang ^{[1
]}

Zhou, Jun ^{[1
]}

机构：

[1] Chinese Acad Agr Sci, Res Inst Pomol, Natl Ctr Eliminating Viruses Deciduous Fruit Tree, Xingcheng 125100, Peoples R China

来源：

ARCHIVES OF VIROLOGY | 2015年 / 160卷 / 10期

关键词：

NUCLEOTIDE-SEQUENCE; GENETIC DIVERSITY; GENOME STRUCTURE; RT-PCR; FOVEAVIRUS; RECOMBINATION; LOCALIZATION; VARIANTS; PROTEIN; CLONES;

D O I：

10.1007/s00705-015-2544-6

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The complete nucleotide sequences of two isolates of grapevine rupestris stem pitting-associated virus (LSL and JF) collected from grapevine of Xingcheng in Liaoning Province, China, were determined. The genomes of both LSL and JF were found to contain five open reading frames (ORFs). Sequence alignments showed that the genomic sequences of JF were 76.1 %-83.5 % identical to the other ten GRSPaV isolates that have been reported previously and that the nucleotide sequence identity of isolate LSL to other isolates was no more than 78 %. Phylogenetic analysis based on the complete genome sequence indicated that JF belongs to group III and that LSL belongs to a new group (group IV). The average genetic distances of the new genetic lineage from groups I, II and III were 0.34, 0.32 and 0.33, respectively.

引用

页码：2641 / 2645

页数：5

共 50 条

[41] Molecular Characterization of the Coat Protein Gene of Greek Apple Stem Pitting Virus Isolates: Evolution through Deletions, Insertions, and Recombination Events [J].

Mathioudakis, Matthaios M. ;

Maliogka, Varvara, I ;

Candresse, Thierry ;

Nickel, Osmar ;

Fajardo, Thor Vinicius Martins ;

Budzynska, Dania ;

Hasiow-Jaroszewska, Beata ;

Katis, Nikolaos, I .

PLANTS-BASEL, 2021, 10 (05)

[42] Biological and molecular characterization of two Brazilian isolates of Apple stem grooving virus [J].

Elen B. Souza ;

Osmar Nickel ;

Thor V. M. Fajardo ;

João M. F. Silva ;

Danielle R. Barros .

Tropical Plant Pathology, 2017, 42 :391-396

[43] Analysis of a short genomic region of Grapevine leafroll-associated virus 1 (GLRaV-1) reveals the presence of two different molecular groups of isolates in Slovakia [J].

Predajna, L. ;

Gaziova, A. ;

Holovicova, E. ;

Glasa, M. .

ACTA VIROLOGICA, 2013, 57 (03) :353-356

[44] Molecular evolution of porcine reproductive and respiratory syndrome virus isolates from central China [J].

Mu, Chunlong ;

Lu, Xiaoyan ;

Duan, Erzhen ;

Chen, Jing ;

Li, Weijuan ;

Zhang, Fenghua ;

Martin, Darren P. ;

Yang, Mingfan ;

Xia, Pingan ;

Cui, Baoan .

RESEARCH IN VETERINARY SCIENCE, 2013, 95 (03) :908-912

[45] Molecular Characterization of Phylogenetically Distinct Isolates of Grapevine fanleaf virus from Iran Based on 2AHP Gene [J].

Sokhandan-Bashir, Nemat ;

Hooshmand, Azam ;

Delpasand-Khabazi, Afsaneh .

INDIAN JOURNAL OF VIROLOGY, 2012, 23 (01) :50-56

[46] The incidence and molecular characteristics of Apple stem grooving virus from pear in China [J].

Hu, G. -J. ;

Wang, G. -P. ;

Wang, L. -P. ;

Hong, Ni. .

AUSTRALASIAN PLANT PATHOLOGY, 2017, 46 (04) :305-311

[47] Molecular variability of five Cucumber mosaic virus isolates from China [J].

Liu, Y. Y. ;

Yu, S. L. ;

Lan, Y. F. ;

Zhang, C. L. ;

Hou, S. S. ;

Li, X. D. ;

Chen, X. Z. ;

Zhu, X. P. .

ACTA VIROLOGICA, 2009, 53 (02) :89-97

[48] Molecular analysis of barley yellow mosaic virus isolates from China [J].

Chen, J ;

Shi, NN ;

Cheng, Y ;

Diao, A ;

Chen, JP ;

Wilson, TMA ;

Antoniw, JF ;

Adams, MJJ .

VIRUS RESEARCH, 1999, 64 (01) :13-21

[49] Identification of Two New Isolates of Chilli veinal mottle virus From Different Regions in China: Molecular Diversity, Phylogenetic and Recombination Analysis [J].

Rao, Shaofei ;

Chen, Xuwei ;

Qiu, Shiyou ;

Peng, Jiejun ;

Zheng, Hongying ;

Lu, Yuwen ;

Wu, Guanwei ;

Chen, Jianping ;

Jiang, Wen ;

Zhang, Yachun ;

Yan, Fei .

FRONTIERS IN MICROBIOLOGY, 2020, 11

[50] Molecular characterization of the 3′-terminal region of Turnip mosaic virus isolates from eastern China [J].

Tian, Y.-P. ;

Zhu, X.-P. ;

Liu, J.-L. ;

Yu, X.-Q. ;

Du, J. ;

Kreuze, J. ;

Li, X.-D. .

JOURNAL OF PHYTOPATHOLOGY, 2007, 155 (06) :333-341

← 1 2 3 4 5 →