Molecular epidemiology of respiratory syncytial virus

被引:65
作者
Pangesti, Krisna N. A. [1 ]
Abd El Ghany, Moataz [2 ,3 ]
Walsh, Michael G. [2 ,3 ]
Kesson, Alison M. [3 ,4 ,5 ]
Hill-Cawthorne, Grant A. [1 ,3 ]
机构
[1] Univ Sydney, Sch Publ Hlth, Sydney, NSW 2006, Australia
[2] Univ Sydney, Westmead Inst Med Res, Sydney, NSW, Australia
[3] Univ Sydney, Marie Bashir Inst Infect Dis & Biosecur, Sydney, NSW, Australia
[4] Univ Sydney, Discipline Child & Adolescent Hlth, Sydney, NSW, Australia
[5] Childrens Hosp Westmead, Dept Infect Dis & Microbiol, Westmead, NSW, Australia
关键词
genotype; molecular epidemiology; respiratory syncytial virus; whole-genome; GROUP-A; GENETIC-VARIABILITY; GROUP-B; G-PROTEIN; NONSTRUCTURAL PROTEINS; CIRCULATION PATTERNS; DISEASE SEVERITY; YOUNG-CHILDREN; GENOTYPE ON1; SUBGROUP-B;
D O I
10.1002/rmv.1968
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Respiratory syncytial virus (RSV) is a major cause of viral acute respiratory tract infections in young children. The virus is characterised by distinct seasonality that is dependent upon the latitude and its ability to cause reinfection. Respiratory syncytial virus demonstrates a complex molecular epidemiology pattern as multiple strains and/or genotypes cocirculate during a single epidemic. Previous studies have investigated the relationship between RSV genetic diversity, reinfection, and clinical features. Here, we review the evidence behind this relationship together with the impact that the advancement of whole genome sequencing will have upon our understanding and the need for reconsidering the classification of RSV genotypes.
引用
收藏
页数:11
相关论文
共 128 条
[1]   Local Evolutionary Patterns of Human Respiratory Syncytial Virus Derived from Whole-Genome Sequencing [J].
Agoti, Charles N. ;
Otieno, James R. ;
Munywoki, Patrick K. ;
Mwihuri, Alexander G. ;
Cane, Patricia A. ;
Nokes, D. James ;
Kellam, Paul ;
Cotten, Matthew .
JOURNAL OF VIROLOGY, 2015, 89 (07) :3444-3454
[2]   Rapid Spread and Diversification of Respiratory Syncytial Virus Genotype ON1, Kenya [J].
Agoti, Charles N. ;
Otieno, James R. ;
Gitahi, Caroline W. ;
Cane, Patricia A. ;
Nokes, D. James .
EMERGING INFECTIOUS DISEASES, 2014, 20 (06) :950-959
[3]   Examining strain diversity and phylogeography in relation to an unusual epidemic pattern of respiratory syncytial virus (RSV) in a long-term refugee camp in Kenya [J].
Agoti, Charles N. ;
Mayieka, Lillian M. ;
Otieno, James R. ;
Ahmed, Jamal A. ;
Fields, Barry S. ;
Waiboci, Lilian W. ;
Nyoka, Raymond ;
Eidex, Rachel B. ;
Marano, Nina ;
Burton, Wagacha ;
Montgomery, Joel M. ;
Breiman, Robert F. ;
Nokes, D. James .
BMC INFECTIOUS DISEASES, 2014, 14
[4]   Genetic Relatedness of Infecting and Reinfecting Respiratory Syncytial Virus Strains Identified in a Birth Cohort From Rural Kenya [J].
Agoti, Charles N. ;
Mwihuri, Alexander G. ;
Sande, Charles J. ;
Onyango, Clayton O. ;
Medley, Graham F. ;
Cane, Patricia A. ;
Nokes, D. James .
JOURNAL OF INFECTIOUS DISEASES, 2012, 206 (10) :1532-1541
[5]   Strategic priorities for respiratory syncytial virus (RSV) vaccine development [J].
Anderson, L. J. ;
Dormitzer, P. R. ;
Nokes, D. J. ;
Rappuoli, R. ;
Roca, A. ;
Graham, B. S. .
VACCINE, 2013, 31 :B209-B215
[6]   Respiratory syncytial virus vaccine development [J].
Anderson, Larry J. .
SEMINARS IN IMMUNOLOGY, 2013, 25 (02) :160-171
[7]   Prevalence and genetic characterization of respiratory syncytial virus (RSV) in hospitalized children in Korea [J].
Baek, Yun Hee ;
Choi, Eun Hye ;
Song, Min-Suk ;
Pascua, Philippe Noriel Q. ;
Kwon, Hyeok-il ;
Park, Su-Jin ;
Lee, Jun Han ;
Woo, Sung-Il ;
Ahn, Byung-Hoon ;
Han, Heon-Seok ;
Hahn, Yoon-Soo ;
Shin, Kyeong-Seob ;
Jang, Hae-Lan ;
Kim, Seok-Yong ;
Choi, Young-Ki .
ARCHIVES OF VIROLOGY, 2012, 157 (06) :1039-1050
[8]   Molecular Epidemiology of Human Respiratory Syncytial Virus Over Three Consecutive Seasons in Latvia [J].
Balmaks, Reinis ;
Ribakova, Irina ;
Gardovska, Dace ;
Kazaks, Andris .
JOURNAL OF MEDICAL VIROLOGY, 2014, 86 (11) :1971-1982
[9]   Nonstructural proteins of respiratory syncytial virus suppress premature apoptosis by an NF-κB-dependent, interferon-independent mechanism and facilitate virus growth [J].
Bitko, Vira ;
Shulyayeva, Ena ;
Mazumder, Barsanjit ;
Musiyenko, Alla ;
Ramaswamy, Murali ;
Look, Dwight C. ;
Barik, Sailen .
JOURNAL OF VIROLOGY, 2007, 81 (04) :1786-1795
[10]   Latitudinal Variations in Seasonal Activity of Influenza and Respiratory Syncytial Virus (RSV): A Global Comparative Review [J].
Bloom-Feshbach, Kimberly ;
Alonso, Wladimir J. ;
Charu, Vivek ;
Tamerius, James ;
Simonsen, Lone ;
Miller, Mark A. ;
Viboud, Cecile .
PLOS ONE, 2013, 8 (02)