The complete genome sequence of PM2, the first lipid-containing bacterial virus to be isolated

被引:56
作者
Männistö, RH
Kivelä, HM
Paulin, L
Bamford, DH
Bamford, JKH
机构
[1] Univ Helsinki, Viikki Bioctr, Dept Biosci, FIN-00014 Helsinki, Finland
[2] Univ Helsinki, Viikki Bioctr, Inst Biotechnol, DNA Synth & Sequencing Lab, FIN-00014 Helsinki, Finland
关键词
PM2; nucleotide sequence; structural proteins; replication initiation protein; plasmid maintenance region;
D O I
10.1006/viro.1999.9837
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Bacteriophage PM2 was isolated from the Pacific Ocean off the coast of Chile in the late 1960s. It was a new virus type, later classified as Corticoviridae, and also the first bacterial virus for which it was demonstrated that lipids are part of the Virion structure. Here we report the determination and analysis of the 10,079-bp circular dsDNA genome sequence. Noteworthy discoveries are the replication initiation system, which is related to the rolling circle mechanism described for phages such as phi X174 and P2, and a 1.2-kb sequence that is similar to the maintenance region of a plasmid found in a marine Pseudoalteromonas sp. strain A28. (C) 1999 Academic Press.
引用
收藏
页码:355 / 363
页数:9
相关论文
共 79 条
  • [1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    Altschul, SF
    Madden, TL
    Schaffer, AA
    Zhang, JH
    Zhang, Z
    Miller, W
    Lipman, DJ
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
  • [2] ARGOS P, 1986, METHOD ENZYMOL, V130, P185
  • [3] BAAS PD, 1988, CURR TOP MICROBIOL, V136, P31
  • [4] The PROSITE database, its status in 1997
    Bairoch, A
    Bucher, P
    Hofmann, K
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (01) : 217 - 221
  • [5] BACTERIOPHAGE PRD1 - A BROAD-HOST-RANGE DSDNA TECTIVIRUS WITH AN INTERNAL MEMBRANE
    BAMFORD, DH
    CALDENTEY, J
    BAMFORD, JKH
    [J]. ADVANCES IN VIRUS RESEARCH, VOL 45, 1995, 45 : 281 - 319
  • [6] GENOME ORGANIZATION OF MEMBRANE-CONTAINING BACTERIOPHAGE-PRD1
    BAMFORD, JKH
    HANNINEN, AL
    PAKULA, TM
    OJALA, PM
    KALKKINEN, N
    FRILANDER, M
    BAMFORD, DH
    [J]. VIROLOGY, 1991, 183 (02) : 658 - 676
  • [7] Bertani E., 1988, BACTERIOPHAGES, V2, P73
  • [8] A new DNA sequence assembly program
    Bonfield, JK
    Smith, KF
    Staden, R
    [J]. NUCLEIC ACIDS RESEARCH, 1995, 23 (24) : 4992 - 4999
  • [9] BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3
  • [10] Brewer G J, 1980, Int Rev Cytol, V68, P53