Switching cell fate, ncRNAs coming to play

被引:41
作者
Guan, D. [1 ]
Zhang, W. [1 ,2 ]
Zhang, W. [1 ,2 ]
Liu, G-H [1 ]
Belmonte, J. C. Izpisua [3 ,4 ]
机构
[1] Chinese Acad Sci, Inst Biophys, Natl Lab Biomacromol, Beijing 100080, Peoples R China
[2] Univ Iowa, Dept Pathol, Carver Coll Med, Iowa City, IA 52242 USA
[3] Salk Inst Biol Studies, Gene Express Lab, La Jolla, CA 92037 USA
[4] Ctr Regenerat Med Barcelona, Barcelona 08003, Spain
基金
美国国家卫生研究院;
关键词
ncRNAs; lncRNAs; microRNAs; reprogramming; trans-differentiation; EMBRYONIC STEM-CELLS; LONG NONCODING RNAS; ADULT HUMAN FIBROBLASTS; FUNCTIONAL-NEURONS; DIRECT CONVERSION; DOPAMINERGIC-NEURONS; HUMAN-DISEASE; PLURIPOTENCY; MOUSE; MICRORNAS;
D O I
10.1038/cddis.2012.196
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Cell fate decision is a critical step during physiological development when embryonic stem cells commit to either becoming adult stem cells or somatic cells. Recent advances in reprogramming demonstrate that a similar set of transcription factors (TFs), which are important for maintaining the pluripotent state of stem cells, can also reprogram somatic cells to induced pluripotent stem cells (iPSCs). In addition, trans-differentiation, which entails the use of different sets of defined factors, whereby one type of somatic cell can be directly converted into another and even to cell types from different germ layers has become a parallel widely used approach for switching cell fate. All these progresses have provided powerful tools to manipulate cells for basic science and therapeutic purposes. Besides protein-based factors, non-coding RNAs (ncRNAs), particularly microRNAs and long ncRNAs, are also involved in cell fate determination, including maintaining self-renewal of pluripotent stem cells and directing cell lineage. Targeting specific ncRNAs represents an alternative promising approach to optimize cell-based disease modeling and regenerative therapy. Here we focus on recent advances of ncRNAs in cell fate decision, including ncRNA-induced iPSCs and lineage conversion. We also discuss some underlying mechanisms and implications in molecular pathogenesis of human diseases. Cell Death and Disease (2013) 4, e464; doi:10.1038/cddis.2012.196; published online 17 January 2013
引用
收藏
页码:e464 / e464
页数:6
相关论文
共 78 条
[1]   Direct Reprogramming of Adult Human Fibroblasts to Functional Neurons under Defined Conditions [J].
Ambasudhan, Rajesh ;
Talantova, Maria ;
Coleman, Ronald ;
Yuan, Xu ;
Zhu, Saiyong ;
Lipton, Stuart A. ;
Ding, Sheng .
CELL STEM CELL, 2011, 9 (02) :113-118
[2]   Molecular Signatures of Human Induced Pluripotent Stem Cells Highlight Sex Differences and Cancer Genes [J].
Anguera, Montserrat C. ;
Sadreyev, Ruslan ;
Zhang, Zhaoqing ;
Szanto, Attila ;
Payer, Bernhard ;
Sheridan, Steven D. ;
Kwok, Showming ;
Haggarty, Stephen J. ;
Sur, Mriganka ;
Alvarez, Jason ;
Gimelbrant, Alexander ;
Mitalipova, Maisam ;
Kirby, James E. ;
Lee, Jeannie T. .
CELL STEM CELL, 2012, 11 (01) :75-90
[3]   Highly Efficient miRNA-Mediated Reprogramming of Mouse and Human Somatic Cells to Pluripotency [J].
Anokye-Danso, Frederick ;
Trivedi, Chinmay M. ;
Juhr, Denise ;
Gupta, Mudit ;
Cui, Zheng ;
Tian, Ying ;
Zhang, Yuzhen ;
Yang, Wenli ;
Gruber, Peter J. ;
Epstein, Jonathan A. ;
Morrisey, Edward E. .
CELL STEM CELL, 2011, 8 (04) :376-388
[4]   Long non-coding RNA-mediated mechanisms independent of the RNAi pathway in animals and plants [J].
Au, Phil Chi Khang ;
Zhu, Qian-Hao ;
Dennis, Elizabeth S. ;
Wang, Ming-Bo .
RNA BIOLOGY, 2011, 8 (03) :404-414
[5]   miR-31 and its host gene lncRNA LOC554202 are regulated by promoter hypermethylation in triple-negative breast cancer [J].
Augoff, Katarzyna ;
McCue, Brian ;
Plow, Edward F. ;
Sossey-Alaoui, Khalid .
MOLECULAR CANCER, 2012, 11
[6]   Senescence impairs successful reprogramming to pluripotent stem cells [J].
Banito, Ana ;
Rashid, Sheikh T. ;
Acosta, Juan Carlos ;
Li, SiDe ;
Pereira, Carlos F. ;
Geti, Imbisaat ;
Pinho, Sandra ;
Silva, Jose C. ;
Azuara, Veronique ;
Walsh, Martin ;
Vallier, Ludovic ;
Gil, Jesus .
GENES & DEVELOPMENT, 2009, 23 (18) :2134-2139
[7]  
Benetatos L, 2012, CELL MOL LIFE SCI
[8]   Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry [J].
Bond, Allison M. ;
VanGompel, Michael J. W. ;
Sametsky, Evgeny A. ;
Clark, Mary F. ;
Savage, Julie C. ;
Disterhoft, John F. ;
Kohtz, Jhumku D. .
NATURE NEUROSCIENCE, 2009, 12 (08) :1020-U91
[9]   Direct generation of functional dopaminergic neurons from mouse and human fibroblasts [J].
Caiazzo, Massimiliano ;
Dell'Anno, Maria Teresa ;
Dvoretskova, Elena ;
Lazarevic, Dejan ;
Taverna, Stefano ;
Leo, Damiana ;
Sotnikova, Tatyana D. ;
Menegon, Andrea ;
Roncaglia, Paola ;
Colciago, Giorgia ;
Russo, Giovanni ;
Carninci, Piero ;
Pezzoli, Gianni ;
Gainetdinov, Raul R. ;
Gustincich, Stefano ;
Dityatev, Alexander ;
Broccoli, Vania .
NATURE, 2011, 476 (7359) :224-U151
[10]   The transcriptional landscape of the mammalian genome [J].
Carninci, P ;
Kasukawa, T ;
Katayama, S ;
Gough, J ;
Frith, MC ;
Maeda, N ;
Oyama, R ;
Ravasi, T ;
Lenhard, B ;
Wells, C ;
Kodzius, R ;
Shimokawa, K ;
Bajic, VB ;
Brenner, SE ;
Batalov, S ;
Forrest, ARR ;
Zavolan, M ;
Davis, MJ ;
Wilming, LG ;
Aidinis, V ;
Allen, JE ;
Ambesi-Impiombato, X ;
Apweiler, R ;
Aturaliya, RN ;
Bailey, TL ;
Bansal, M ;
Baxter, L ;
Beisel, KW ;
Bersano, T ;
Bono, H ;
Chalk, AM ;
Chiu, KP ;
Choudhary, V ;
Christoffels, A ;
Clutterbuck, DR ;
Crowe, ML ;
Dalla, E ;
Dalrymple, BP ;
de Bono, B ;
Della Gatta, G ;
di Bernardo, D ;
Down, T ;
Engstrom, P ;
Fagiolini, M ;
Faulkner, G ;
Fletcher, CF ;
Fukushima, T ;
Furuno, M ;
Futaki, S ;
Gariboldi, M .
SCIENCE, 2005, 309 (5740) :1559-1563