Molecular Phylogenetic Analysis of Olea europaea L. subsp europaea Cultivars Grown in the Marmara Region, Turkey

被引:0
作者
Coskun, F. [1 ]
Parlak, S. [2 ]
机构
[1] Balikesir Univ, Dept Biol, Coll Arts & Sci, Balikesir, Turkey
[2] Balikesir Univ, Dept Biol, Inst Sci & Technol, Balikesir, Turkey
来源
SAINS MALAYSIANA | 2013年 / 42卷 / 10期
关键词
Genetic distance; Marmara Region; Olea europaea subsp Europaea; olive cultivars; phylogenetic relationships; RAPD; GENETIC DIVERSITY; OLIVE OIL; ACCESSIONS; POLYMORPHISM; RAPD;
D O I
暂无
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
DNA markers based on the PCR techniques are being broadly utilized during the past two decades. Randomly Amplified Polymorphic DNA (RAPD) is one of these techniques employed for determining the polymorphisms. In this study, we performed a molecular analysis using DNA markers for some olive (Olea europaea) cultivars grown in the Marmara Region of Turkey. Our goal was to determine the genetic relationships between 12 olive cultivars and 'Delice', the outgroup. Seven RAPD primers out of 60 (10 base-pair long) amplified gDNAs with repeatable bands. These primers generated 84 characters / bands in total and 39 out of these were polymorphic. After a Branch-and-Bound analysis and a Neighbour Joining (NJ) analysis via PAUP* software, the smallest genetic distance was found between Gordales and Karamursel Su cultivars as 0.03571 whereas the greatest distances were found between Arbequina and Ascolana, Manzanilla, Hermandos, Gemlik, Verdial and Vegral cultivars as 0.17857, respectively. Maximum parsimony (MP) analysis yielded 8 equally most parsimonious trees with 65 steps. Alternatively, NJ analysis produced one tree mostly congruent with MP tree number one. In conclusion, Turkish olive cultivars grown in the Marmara Region appear to be sister to the Spanish olive cultivars based on the RAPD data.
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页码:1357 / 1364
页数:8
相关论文
共 27 条
[1]   Structure of genetic diversity in Olea europaea L. cultivars from central Italy [J].
Albertini, Emidio ;
Torricelli, Renzo ;
Bitocchi, Elena ;
Raggi, Lorenzo ;
Marconi, Gianpiero ;
Pollastri, Luciano ;
Di Minco, Gabriella ;
Battistini, Alfredo ;
Papa, Roberto ;
Veronesi, Fabio .
MOLECULAR BREEDING, 2011, 27 (04) :533-547
[2]   Molecular markers in olive:: an integrated approach [J].
Belaj, A. ;
Ojeda, A. ;
Munoz, C. ;
Trujillo, I. ;
Barranco, D. ;
Rallo, L. ;
de la Rosa, R. ;
Rallo, P. ;
Diaz, A. ;
Martin, A. ;
Baldoni, L. .
PROCEEDINGS OF THE FIFTH INTERNATIONAL SYMPOSIUM ON OLIVE GROWING, VOLS 1 AND 2, 2008, (791) :45-+
[3]   Multiple origins for Mediterranean olive (Olea europaea L-ssp europaea) based upon mitochondrial DNA polymorphisms [J].
Besnard, G ;
Bervillé, A .
COMPTES RENDUS DE L ACADEMIE DES SCIENCES SERIE III-SCIENCES DE LA VIE-LIFE SCIENCES, 2000, 323 (02) :173-181
[4]   Molecular studies in olive (Olea europaea L.): overview on DNA markers applications and recent advances in genome analysis [J].
Bracci, T. ;
Busconi, M. ;
Fogher, C. ;
Sebastiani, L. .
PLANT CELL REPORTS, 2011, 30 (04) :449-462
[5]   DNA extraction from olive oil and its use in the identification of the production cultivar [J].
Busconi, M ;
Foroni, C ;
Corradi, M ;
Bongiorni, C ;
Cattapan, F ;
Fogher, C .
FOOD CHEMISTRY, 2003, 83 (01) :127-134
[6]  
Efe R., 2011, OLIVE OLIVE OIL TURK, P334
[7]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[8]  
Green P. S., 2002, Kew Bulletin, V57, P91, DOI 10.2307/4110824
[9]  
Harwood JL, 2002, EUR J LIPID SCI TECH, V104, P685, DOI 10.1002/1438-9312(200210)104:9/10<685::AID-EJLT685>3.0.CO
[10]  
2-Q