Solving application oriented graph theoretical problems with DNA computing

被引:0
作者
Halasz, Veronika [1 ]
Hegedues, Laszlo [1 ]
Hornyak, Istvan [1 ]
Nagy, Benedek [2 ]
机构
[1] Univ Debrecen, Fac Informat, Debrecen, Hungary
[2] Univ Debrecen, Fac Informat, Dept Comp Sci, Debrecen, Hungary
来源
PROCEEDINGS OF SEVENTH INTERNATIONAL CONFERENCE ON BIO-INSPIRED COMPUTING: THEORIES AND APPLICATIONS (BIC-TA 2012), VOL 1 | 2013年 / 201卷
关键词
DNA computing; Graph algorithms; Bipartite graphs; DNA algorithm; Networks; Social network; Bioinformatics; NETWORKS;
D O I
10.1007/978-81-322-1038-2_7
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Social networks are represented by graphs. Important features of the network, e.g., length of shortest paths, centrality, are given by graph theoretical way. Bipartite graphs are used to represent various problems, for example, in medicine or in economy. The relations between customers and goods can be represented by bipartite graphs. Genes and various diseases can also form a bipartite graph, where a disease is connected to those genes that could cause it. In this paper DNA computing approach is presented for solving some graph theoretical problems. Since DNA computing uses a massively parallel approach, hard graph theoretical problems can be solved (at least in theory). Our main contribution is to present Projection algorithms for bipartite graphs; the molecular tube obtained by them can be used as a base for further processes.
引用
收藏
页码:75 / +
页数:2
相关论文
共 12 条
[1]   MOLECULAR COMPUTATION OF SOLUTIONS TO COMBINATORIAL PROBLEMS [J].
ADLEMAN, LM .
SCIENCE, 1994, 266 (5187) :1021-1024
[2]  
[Anonymous], 2018, The formula: The universal laws of success
[3]  
Asratian A. S., 1998, Cambridge Tracts in Mathematics
[4]   DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks [J].
Bauer-Mehren, Anna ;
Rautschka, Michael ;
Sanz, Ferran ;
Furlong, Laura I. .
BIOINFORMATICS, 2010, 26 (22) :2924-2926
[5]   Application of DNA computing in graph theory [J].
Eghdami, Hossein ;
Darehmiraki, Majid .
ARTIFICIAL INTELLIGENCE REVIEW, 2012, 38 (03) :223-235
[6]   Combinatorics of perfect matchings in plane bipartite graphs and application to tilings [J].
Fournier, JC .
THEORETICAL COMPUTER SCIENCE, 2003, 303 (2-3) :333-351
[7]   CENTRALITY IN SOCIAL NETWORKS CONCEPTUAL CLARIFICATION [J].
FREEMAN, LC .
SOCIAL NETWORKS, 1979, 1 (03) :215-239
[8]   DNA SOLUTION OF HARD COMPUTATIONAL PROBLEMS [J].
LIPTON, RJ .
SCIENCE, 1995, 268 (5210) :542-545
[9]   Insights into Protein-DNA Interactions through Structure Network Analysis [J].
Sathyapriya, R. ;
Vijayabaskar, M. S. ;
Vishveshwara, Saraswathi .
PLOS COMPUTATIONAL BIOLOGY, 2008, 4 (09)
[10]  
Tanay Amos, 2002, Bioinformatics, V18 Suppl 1, pS136