Can clone size serve as a proxy for clone age?An exploration using microsatellite divergence in Populus tremuloides

被引:70
作者
Ally, D. [1 ,2 ]
Ritland, K. [2 ]
Otto, S. P. [1 ]
机构
[1] Univ British Columbia, Dept Zool, Vancouver, BC V6T 1Z4, Canada
[2] Univ British Columbia, Dept Forest Sci, Forest Sci Ctr, Vancouver, BC V6T 1Z4, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
clone age; clone size; coalescence; microsatellite divergence; Populus tremuloides; somatic mutation;
D O I
10.1111/j.1365-294X.2008.03962.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In long-lived clonal plants, the overall size of a clone is often used to estimate clone age. The size of a clone, however, might be largely determined by physical or biotic interactions, obscuring the relationship between clone size and age. Here, we use the accumulation of mutations at 14 microsatellite loci to estimate clone age in trembling aspen (Populus tremuloides) from southwestern Canada. We show that the observed patterns of genetic divergence are consistent with a model of increasing ramet population size, allowing us to use pairwise genetic divergence as an estimator of clone age. In the populations studied, clone size did not exhibit a significant relationship with microsatellite divergence, indicating that clone size is not a good proxy for clone age. In P. tremuloides, the per-locus per-year neutral somatic mutation rate across 14 microsatellite loci was estimated to lie between 6 x 10(-7) (lower bound) and 4 x 10(-5) (upper bound).
引用
收藏
页码:4897 / 4911
页数:15
相关论文
共 68 条
[1]   PALYNOLOGY AND PALEOCLIMATIC SIGNIFICANCE OF A DATED CORE OF HOLOCENE PEAT, OKANAGAN VALLEY, SOUTHERN BRITISH-COLUMBIA [J].
ALLEY, NF .
CANADIAN JOURNAL OF EARTH SCIENCES, 1976, 13 (08) :1131-1144
[2]  
ALLY D, 2008, THESIS U BRIT COLUMB
[3]  
[Anonymous], 2006, R LANG ENV STAT COMP
[4]   Analysis of cell division and elongation underlying the developmental acceleration of root growth in Arabidopsis thaliana [J].
Beemster, GTS ;
Baskin, TI .
PLANT PHYSIOLOGY, 1998, 116 (04) :1515-1526
[5]   NUCLEAR DNA CONTENT AND MINIMUM GENERATION TIME IN HERBACEOUS PLANTS [J].
BENNETT, MD .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1972, 181 (1063) :109-+
[6]  
BERTORELLE G, 1995, MOL BIOL EVOL, V12, P887
[7]  
BUJAK CA, 1974, THESIS U CALGARY CAL
[8]   FIRE HISTORY AND GRASSLAND VEGETATION CHANGE - 3 POLLEN DIAGRAMS FROM SOUTHERN BRITISH-COLUMBIA [J].
CAWKER, KB .
CANADIAN JOURNAL OF BOTANY-REVUE CANADIENNE DE BOTANIQUE, 1983, 61 (04) :1126-1139
[9]  
Cervera MT, 2001, GENETICS, V158, P787
[10]   Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci [J].
Chakraborty, R ;
Kimmel, M ;
Stivers, DN ;
Davison, LJ ;
Deka, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (03) :1041-1046