Computer-enhanced high-throughput genetic screens of C. elegans in a microfluidic system

被引:61
作者
Crane, Matthew M. [1 ]
Chung, Kwanghun [2 ]
Lu, Hang [1 ,2 ]
机构
[1] Georgia Inst Technol, Interdisciplinary Program Bioengn, Atlanta, GA 30332 USA
[2] Georgia Inst Technol, Sch Chem & Biomol Engn, Atlanta, GA USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
CAENORHABDITIS-ELEGANS; INTERFERENCE; RNA;
D O I
10.1039/b813730g
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Most visual screens based on fluorescent markers are currently limited in throughput and accuracy. Here we present the first genetic screen of a mutagenized population of C. elegans in a microfluidic device. Animal handling streamlined by a microfluidic device and intuitive control software enabled the identification of novel mutants and a large screening speed.
引用
收藏
页码:38 / 40
页数:3
相关论文
共 15 条
[1]   Microfluidics for in vivo imaging of neuronal and behavioral activity in Caenorhabditis elegans [J].
Chronis, Nikos ;
Zimmer, Manuel ;
Bargmann, Cornelia I. .
NATURE METHODS, 2007, 4 (09) :727-731
[2]   Automated on-chip rapid microscopy, phenotyping and sorting of C. elegans [J].
Chung, Kwanghun ;
Crane, Matthew M. ;
Lu, Hang .
NATURE METHODS, 2008, 5 (07) :637-643
[3]   Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans [J].
Dupuy, Denis ;
Bertin, Nicolas ;
Hidalgo, Cesar A. ;
Venkatesan, Kavitha ;
Tu, Domena ;
Lee, David ;
Rosenberg, Jennifer ;
Svrzikapa, Nenad ;
Blanc, Aurelie ;
Carnec, Alain ;
Carvunis, Anne-Ruxandra ;
Pulak, Rock ;
Shingles, Jane ;
Reece-Hoyes, John ;
Hunt-Newbury, Rebecca ;
Viveiros, Ryan ;
Mohler, William A. ;
Tasan, Murat ;
Roth, Frederick P. ;
Le Peuch, Christian ;
Hope, Ian A. ;
Johnsen, Robert ;
Moerman, Donald G. ;
Barabasi, Albert-Laszlo ;
Baillie, David ;
Vidal, Marc .
NATURE BIOTECHNOLOGY, 2007, 25 (06) :663-668
[4]   Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans [J].
Fire, A ;
Xu, SQ ;
Montgomery, MK ;
Kostas, SA ;
Driver, SE ;
Mello, CC .
NATURE, 1998, 391 (6669) :806-811
[5]   Automated sorting of live transgenic embryos [J].
Furlong, EEM ;
Profitt, D ;
Scott, MP .
NATURE BIOTECHNOLOGY, 2001, 19 (02) :153-156
[6]   C-elegans RPM-1 regulates axon termination and synaptogenesis through the Rab GEF GLO-4 and the Rab GTPase GLO-1 [J].
Grill, Brock ;
Bienvenut, Willy V. ;
Brown, Heather M. ;
Ackley, Brian D. ;
Quadroni, Manfredo ;
Jin, Yishi .
NEURON, 2007, 55 (04) :587-601
[7]   Femtosecond laser nanoaxotomy lab-on-achip for in vivo nerve regeneration studies [J].
Guo, Samuel X. ;
Bourgeois, Frederic ;
Chokshi, Trushal ;
Durr, Nicholas J. ;
Hilliard, Massimo A. ;
Chronis, Nikos ;
Ben-Yakar, Adela .
NATURE METHODS, 2008, 5 (06) :531-533
[8]   A microfabricated array of clamps for immobilizing and imaging C-elegans [J].
Hulme, S. Elizabeth ;
Shevkoplyas, Sergey S. ;
Apfeld, Javier ;
Fontana, Walter ;
Whitesides, George M. .
LAB ON A CHIP, 2007, 7 (11) :1515-1523
[9]   The art and design of genetic screens:: Caenorhabditis elegans [J].
Jorgensen, EM ;
Mango, SE .
NATURE REVIEWS GENETICS, 2002, 3 (05) :356-369
[10]  
Kim JK, 2005, SCIENCE, V308, P1164, DOI 10.1126/science.1109267