In vitro selection of peptide aptamers with affinity to single-wall carbon nanotubes using a ribosome display

被引:23
作者
Li, Zha [1 ,2 ]
Uzawa, Takanori [1 ]
Tanaka, Takashi [3 ]
Hida, Akira [4 ]
Ishibashi, Koji [4 ]
Katakura, Hiromichi [3 ]
Kobatake, Eiry [2 ]
Ito, Yoshihiro [1 ]
机构
[1] RIKEN, Adv Sci Inst, Nano Med Engn Lab, Wako, Saitama 3510198, Japan
[2] Tokyo Inst Technol, Dept Biol Informat, Grad Sch Biosci & Biotechnol, Midori Ku, Yokohama, Kanagawa 2268501, Japan
[3] Natl Inst Adv Ind Sci & Technol, Nanosyst Res Inst NRI, Tsukuba, Ibaraki 3058562, Japan
[4] RIKEN, Adv Sci Inst, Adv Device Lab, Wako, Saitama 3510198, Japan
关键词
Aptamer; In vitro selection; Peptide; Ribosome display; Single-wall carbon nanotubes; DISPERSION; PROTEIN; WATER; SOLUBILIZATION; FLUORESCENCE; CHIRALITY;
D O I
10.1007/s10529-012-1049-6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A ribosome display from a diverse random library was applied for selecting peptide aptamers with high binding affinity to single-wall carbon nanotubes (SWCNTs). The selected peptide aptamer bound to and solubilized SWCNTs more strongly than did the peptide aptamer selected by a phage display method reported previously, and more strongly than other commonly used organic surfactants. The fluorescence spectrum of this aptamer showed a red shift upon interaction with SWCNTs but circular dichroism spectroscopy did not show any significant difference between the presence or absence of SWCNT binding.
引用
收藏
页码:39 / 45
页数:7
相关论文
共 30 条
[1]   Carbohydrate coating of carbon nanotubes for biological recognition [J].
Akasaka, Tsukasa ;
Watari, Fumio .
FULLERENES NANOTUBES AND CARBON NANOSTRUCTURES, 2008, 16 (02) :114-125
[2]   A fast effective route to pH-dependent water-dispersion of oxidized single-walled carbon nanotubes [J].
Arrais, A ;
Diana, E ;
Pezzini, D ;
Rossetti, R ;
Boccaleri, E .
CARBON, 2006, 44 (03) :587-590
[3]   Organization and dynamics of tryptophan residues in erythroid spectrin: Novel structural features of denatured spectrin revealed by the wavelength-selective fluorescence approach [J].
Chattopadhyay, A ;
Rawat, SS ;
Kelkar, DA ;
Ray, S ;
Chakrabarti, A .
PROTEIN SCIENCE, 2003, 12 (11) :2389-2403
[4]   Sequence Specific Association of Tryptic Peptides with Multiwalled Carbon Nanotubes: Effect of Localization of Hydrophobic Residues [J].
Deshpande, Megha S. ;
Mazumdar, Shyamalava .
BIOMACROMOLECULES, 2012, 13 (05) :1410-1419
[5]   Dispersion of Carbon Nanotubes in Water by Noncovalent Wrapping with Peptides Screened by Phage Display [J].
Ejima, Hirotaka ;
Matsumiya, Kisei ;
Yui, Hiroharu ;
Serizawa, Takeshi .
CHEMISTRY LETTERS, 2011, 40 (08) :880-882
[6]  
Ghosh S, 2010, NAT NANOTECHNOL, V5, P443, DOI [10.1038/NNANO.2010.68, 10.1038/nnano.2010.68]
[7]   mRNA display:: Diversity matters during in vitro selection [J].
Gold, L .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (09) :4825-4826
[8]   Nearly Single-Chirality Single-Walled Carbon Nanotubes Produced via Orthogonal Iterative Density Gradient Ultracentrifugation [J].
Green, Alexander A. ;
Hersam, Mark C. .
ADVANCED MATERIALS, 2011, 23 (19) :2185-+
[9]   Computational Design of Virus-Like Protein Assemblies on Carbon Nanotube Surfaces [J].
Grigoryan, Gevorg ;
Kim, Yong Ho ;
Acharya, Rudresh ;
Axelrod, Kevin ;
Jain, Rishabh M. ;
Willis, Lauren ;
Drndic, Marija ;
Kikkawa, James M. ;
DeGrado, William F. .
SCIENCE, 2011, 332 (6033) :1071-1076
[10]   In vitro selection and evolution of functional proteins by using ribosome display [J].
Hanes, J ;
Pluckthun, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (10) :4937-4942