Base Excision Repair

被引:897
作者
Krokan, Hans E. [1 ]
Bjoras, Magnar [2 ]
机构
[1] Norwegian Univ Sci & Technol, Dept Canc Res & Mol Med, N-7489 Trondheim, Norway
[2] Oslo Univ Hosp, Dept Microbiol, N-0424 Oslo, Norway
关键词
3-METHYLADENINE DNA GLYCOSYLASE; STRAND BREAK REPAIR; HAIRPIN-HELIX SUPERFAMILY; POLYMERASE-BETA; ESCHERICHIA-COLI; CRYSTAL-STRUCTURE; STRUCTURAL BASIS; DAMAGED DNA; CELL-CYCLE; SOMATIC HYPERMUTATION;
D O I
10.1101/cshperspect.a012583
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Base excision repair (BER) corrects DNA damage from oxidation, deamination and alkylation. Such base lesions cause little distortion to the DNA helix structure. BER is initiated by a DNA glycosylase that recognizes and removes the damaged base, leaving an abasic site that is further processed by short-patch repair or long-patch repair that largely uses different proteins to complete BER. At least 11 distinct mammalian DNA glycosylases are known, each recognizing a few related lesions, frequently with some overlap in specificities. Impressively, the damaged bases are rapidly identified in a vast excess of normal bases, without a supply of energy. BER protects against cancer, aging, and neurodegeneration and takes place both in nuclei and mitochondria. More recently, an important role of uracil-DNA glycosylase UNG2 in adaptive immunity was revealed. Furthermore, other DNA glycosylases may have important roles in epigenetics, thus expanding the repertoire of BER proteins.
引用
收藏
页码:1 / 22
页数:22
相关论文
共 173 条
[1]   The Bacillus subtilis counterpart of the mammalian 3-methyladenine DNA glycosylase has hypoxanthine and 1,N6-ethenoadenine as preferred substrates [J].
Aamodt, RM ;
Falnes, PO ;
Johansen, RF ;
Seeberg, E ;
Bjorås, M .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (14) :13601-13606
[2]  
Aburatani H, 1997, CANCER RES, V57, P2151
[3]   Different organization of base excision repair of uracil in DNA in nuclei and mitochondria and selective upregulation of mitochondrial uracil-DNA glycosylase after oxidative stress [J].
Akbari, M. ;
Otterlei, M. ;
Pena-Diaz, J. ;
Krokan, H. E. .
NEUROSCIENCE, 2007, 145 (04) :1201-1212
[4]   Repair of U/G and U/A in DNA by UNG2-associated repair complexes takes place predominantly by short-patch repair both in proliferating and growth-arrested cells [J].
Akbari, M ;
Otterlei, M ;
Peña-Diaz, J ;
Aas, PA ;
Kavli, B ;
Liabakk, NB ;
Hagen, L ;
Imai, K ;
Durandy, A ;
Slupphaug, G ;
Krokan, HE .
NUCLEIC ACIDS RESEARCH, 2004, 32 (18) :5486-5498
[5]   Mitochondrial base excision repair of uracil and AP sites takes place by single-nucleotide insertion and long-patch DNA synthesis [J].
Akbari, Mansour ;
Visnes, Torkild ;
Krokan, Hans E. ;
Otterlei, Marit .
DNA REPAIR, 2008, 7 (04) :605-616
[6]   Extracts of proliferating and non-proliferating human cells display different base excision pathways and repair fidelity [J].
Akbari, Mansour ;
Pena-Diaz, Javier ;
Andersen, Sonja ;
Liabakk, Nina-Beate ;
Otterlei, Marit ;
Krokan, Hans Einar .
DNA REPAIR, 2009, 8 (07) :834-843
[7]   A unified view of base excision repair: Lesion-dependent protein complexes regulated by post-translational modification [J].
Almeida, Karen H. ;
Sobol, Robert W. .
DNA REPAIR, 2007, 6 (06) :695-711
[8]   A new protein superfamily includes two novel 3-methyladenine DNA glycosylases from Bacillus cereus, AlkC and AlkD [J].
Alseth, I ;
Rognes, T ;
Lindbäck, T ;
Solberg, I ;
Robertsen, K ;
Kristiansen, KI ;
Mainieri, D ;
Lillehagen, L ;
Kolsto, AB ;
Bjorås, M .
MOLECULAR MICROBIOLOGY, 2006, 59 (05) :1602-1609
[9]   Incorporation of dUMP into DNA is a major source of spontaneous DNA damage, while excision of uracil is not required for cytotoxicity of fluoropyrimidines in mouse embryonic fibroblasts [J].
Andersen, S ;
Heine, T ;
Sneve, R ;
König, I ;
Krokan, HE ;
Epe, B ;
Nilsen, H .
CARCINOGENESIS, 2005, 26 (03) :547-555
[10]  
[Anonymous], 2005, DNA REPAIR MUTAGENES