Genotyping of Mycobacterium intracellulare isolates and clinical characteristics of lung disease

被引:14
作者
Kim, S-Y. [1 ]
Lee, S-T. [2 ]
Jeong, B-H. [1 ]
Park, H. Y. [1 ]
Jeon, K. [1 ]
Kim, J-W. [2 ]
Shin, S. J. [3 ]
Koh, W-J. [1 ]
机构
[1] Sungkyunkwan Univ, Sch Med, Samsung Med Ctr, Div Pulm & Crit Care Med,Dept Med, Seoul 135710, South Korea
[2] Sungkyunkwan Univ, Sch Med, Samsung Med Ctr, Dept Lab Med & Genet, Seoul 135710, South Korea
[3] Yonsei Univ, Coll Med, Dept Microbiol, Seoul, South Korea
关键词
Mycobacterium intracellulare; genotype; tandem repeat sequences; lung disease progression; NUMBER TANDEM-REPEAT; PULMONARY NONTUBERCULOUS MYCOBACTERIA; VARIABLE-NUMBER; AVIUM; IDENTIFICATION; PREVALENCE; PARATUBERCULOSIS; SEQUENCE; STRAINS; ONTARIO;
D O I
10.5588/ijtld.12.0575
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
BACKGROUND: Variable number of tandem repeats (VNTR) loci were recently identified in Japanese isolates of Mycobacterium intracellulare. We hypothesised that some mycobacterial genotypes are more virulent than others, resulting in particular genotypes being associated with disease phenotype and progression. OBJECTIVE: To evaluate the VNTR loci of M. intracellulare in clinical isolates from Korean patients, and investigate the association between mycobacterial genotype and disease phenotype and progression. DESIGN: In total, 70 M. intracellulare clinical isolates were genotyped using 16 M. intracellulare VNTR loci. RESULTS: VNTR typing showed strong discriminatory power and genetic diversity for molecular epidemiological studies of M. intracellulare. In a phylogenetic tree, the M. intracellulare clinical isolates were divided into two clusters (A and B). Cluster A was observed more frequently (77%) than Cluster B; however, there was no association between the clinical characteristics, disease progression, drug susceptibility and clusters based on VNTR genotyping. CONCLUSIONS: VNTR typing could be used for epidemiological studies of M. intracellulare lung disease; however, no association was found between the specific VNTR genotypes of M. intracellulare and the clinical characteristics of Korean patients.
引用
收藏
页码:669 / 675
页数:7
相关论文
共 35 条
  • [21] Nontuberculous Mycobacterial Lung Disease Prevalence at Four Integrated Health Care Delivery Systems
    Prevots, D. Rebecca
    Shaw, Pamela A.
    Strickland, Daniel
    Jackson, Lisa A.
    Raebel, Marsha A.
    Blosky, Mary Ann
    de Oca, Ruben Montes
    Shea, Yvonne R.
    Seitz, Amy E.
    Holland, Steven M.
    Olivier, Kenneth N.
    [J]. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2010, 182 (07) : 970 - 976
  • [22] Determination of Genotypic Diversity of Mycobacterium avium Subspecies from Human and Animal Origins by Mycobacterial Interspersed Repetitive-Unit-Variable-Number Tandem-Repeat and IS1311 Restriction Fragment Length Polymorphism Typing Methods
    Radomski, Nicolas
    Thibault, Virginie C.
    Karoui, Claudine
    de Cruz, Krystel
    Cochard, Thierry
    Gutierrez, Cristina
    Supply, Philip
    Biet, Frank
    Boschiroli, Maria Laura
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (04) : 1026 - 1034
  • [23] METHODS OF MULTILOCUS ENZYME ELECTROPHORESIS FOR BACTERIAL POPULATION-GENETICS AND SYSTEMATICS
    SELANDER, RK
    CAUGANT, DA
    OCHMAN, H
    MUSSER, JM
    GILMOUR, MN
    WHITTAM, TS
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1986, 51 (05) : 873 - 884
  • [24] Standardized Combination Antibiotic Treatment of Mycobacterium avium Complex Lung Disease
    Sim, Yun Su
    Park, Hye Yun
    Jeon, Kyeongman
    Suh, Gee Young
    Kwon, O. Jung
    Koh, Won-Jung
    [J]. YONSEI MEDICAL JOURNAL, 2010, 51 (06) : 888 - 894
  • [25] Nontuberculous Mycobacteria in Respiratory Tract Infections, Eastern Asia
    Simons, Sami
    van Ingen, Jakko
    Hsueh, Po-Ren
    Nguyen Van Hung
    Dekhuijzen, P. N. Richard
    Boeree, Martin J.
    van Soolingen, Dick
    [J]. EMERGING INFECTIOUS DISEASES, 2011, 17 (03) : 343 - 349
  • [26] Correlation between variable-number tandem-repeat-based genotypes and drug susceptibility in Mycobacterium avium isolates
    Tatano, Y.
    Sano, C.
    Yasumoto, K.
    Shimizu, T.
    Sato, K.
    Nishimori, K.
    Matsumoto, T.
    Yano, S.
    Takeyama, H.
    Tomioka, H.
    [J]. EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2012, 31 (04) : 445 - 454
  • [27] RAPID IDENTIFICATION OF MYCOBACTERIA TO THE SPECIES LEVEL BY POLYMERASE CHAIN-REACTION AND RESTRICTION ENZYME ANALYSIS
    TELENTI, A
    MARCHESI, F
    BALZ, M
    BALLY, F
    BOTTGER, EC
    BODMER, T
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 1993, 31 (02) : 175 - 178
  • [28] New variable-number tandem-repeat markers for typing Mycobacterium avium subsp paratuberculosis and M-avium strains:: Comparison with IS900 and IS1245 restriction fragment length polymorphism typing
    Thibault, Virginie C.
    Grayon, Maggy
    Boschiroli, Maria Laura
    Hubbans, Christine
    Overduin, Pieter
    Stevenson, Karen
    Gutierrez, Maria Cristina
    Supply, Philip
    Biet, Franck
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (08) : 2404 - 2410
  • [29] Changing Epidemiology of Pulmonary Nontuberculous Mycobacteria Infections
    Thomson, Rachel M.
    [J]. EMERGING INFECTIOUS DISEASES, 2010, 16 (10) : 1576 - 1583
  • [30] Necessity of quality-controlled 16S rRNA gene sequence databases:: Identifying nontuberculous Mycobacterium species
    Turenne, CY
    Tschetter, L
    Wolfe, J
    Kabani, A
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2001, 39 (10) : 3637 - 3648