Genotyping of Mycobacterium intracellulare isolates and clinical characteristics of lung disease

被引:14
作者
Kim, S-Y. [1 ]
Lee, S-T. [2 ]
Jeong, B-H. [1 ]
Park, H. Y. [1 ]
Jeon, K. [1 ]
Kim, J-W. [2 ]
Shin, S. J. [3 ]
Koh, W-J. [1 ]
机构
[1] Sungkyunkwan Univ, Sch Med, Samsung Med Ctr, Div Pulm & Crit Care Med,Dept Med, Seoul 135710, South Korea
[2] Sungkyunkwan Univ, Sch Med, Samsung Med Ctr, Dept Lab Med & Genet, Seoul 135710, South Korea
[3] Yonsei Univ, Coll Med, Dept Microbiol, Seoul, South Korea
关键词
Mycobacterium intracellulare; genotype; tandem repeat sequences; lung disease progression; NUMBER TANDEM-REPEAT; PULMONARY NONTUBERCULOUS MYCOBACTERIA; VARIABLE-NUMBER; AVIUM; IDENTIFICATION; PREVALENCE; PARATUBERCULOSIS; SEQUENCE; STRAINS; ONTARIO;
D O I
10.5588/ijtld.12.0575
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
BACKGROUND: Variable number of tandem repeats (VNTR) loci were recently identified in Japanese isolates of Mycobacterium intracellulare. We hypothesised that some mycobacterial genotypes are more virulent than others, resulting in particular genotypes being associated with disease phenotype and progression. OBJECTIVE: To evaluate the VNTR loci of M. intracellulare in clinical isolates from Korean patients, and investigate the association between mycobacterial genotype and disease phenotype and progression. DESIGN: In total, 70 M. intracellulare clinical isolates were genotyped using 16 M. intracellulare VNTR loci. RESULTS: VNTR typing showed strong discriminatory power and genetic diversity for molecular epidemiological studies of M. intracellulare. In a phylogenetic tree, the M. intracellulare clinical isolates were divided into two clusters (A and B). Cluster A was observed more frequently (77%) than Cluster B; however, there was no association between the clinical characteristics, disease progression, drug susceptibility and clusters based on VNTR genotyping. CONCLUSIONS: VNTR typing could be used for epidemiological studies of M. intracellulare lung disease; however, no association was found between the specific VNTR genotypes of M. intracellulare and the clinical characteristics of Korean patients.
引用
收藏
页码:669 / 675
页数:7
相关论文
共 35 条
[21]   Nontuberculous Mycobacterial Lung Disease Prevalence at Four Integrated Health Care Delivery Systems [J].
Prevots, D. Rebecca ;
Shaw, Pamela A. ;
Strickland, Daniel ;
Jackson, Lisa A. ;
Raebel, Marsha A. ;
Blosky, Mary Ann ;
de Oca, Ruben Montes ;
Shea, Yvonne R. ;
Seitz, Amy E. ;
Holland, Steven M. ;
Olivier, Kenneth N. .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2010, 182 (07) :970-976
[22]   Determination of Genotypic Diversity of Mycobacterium avium Subspecies from Human and Animal Origins by Mycobacterial Interspersed Repetitive-Unit-Variable-Number Tandem-Repeat and IS1311 Restriction Fragment Length Polymorphism Typing Methods [J].
Radomski, Nicolas ;
Thibault, Virginie C. ;
Karoui, Claudine ;
de Cruz, Krystel ;
Cochard, Thierry ;
Gutierrez, Cristina ;
Supply, Philip ;
Biet, Frank ;
Boschiroli, Maria Laura .
JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (04) :1026-1034
[23]   METHODS OF MULTILOCUS ENZYME ELECTROPHORESIS FOR BACTERIAL POPULATION-GENETICS AND SYSTEMATICS [J].
SELANDER, RK ;
CAUGANT, DA ;
OCHMAN, H ;
MUSSER, JM ;
GILMOUR, MN ;
WHITTAM, TS .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1986, 51 (05) :873-884
[24]   Standardized Combination Antibiotic Treatment of Mycobacterium avium Complex Lung Disease [J].
Sim, Yun Su ;
Park, Hye Yun ;
Jeon, Kyeongman ;
Suh, Gee Young ;
Kwon, O. Jung ;
Koh, Won-Jung .
YONSEI MEDICAL JOURNAL, 2010, 51 (06) :888-894
[25]   Nontuberculous Mycobacteria in Respiratory Tract Infections, Eastern Asia [J].
Simons, Sami ;
van Ingen, Jakko ;
Hsueh, Po-Ren ;
Nguyen Van Hung ;
Dekhuijzen, P. N. Richard ;
Boeree, Martin J. ;
van Soolingen, Dick .
EMERGING INFECTIOUS DISEASES, 2011, 17 (03) :343-349
[26]   Correlation between variable-number tandem-repeat-based genotypes and drug susceptibility in Mycobacterium avium isolates [J].
Tatano, Y. ;
Sano, C. ;
Yasumoto, K. ;
Shimizu, T. ;
Sato, K. ;
Nishimori, K. ;
Matsumoto, T. ;
Yano, S. ;
Takeyama, H. ;
Tomioka, H. .
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2012, 31 (04) :445-454
[27]   RAPID IDENTIFICATION OF MYCOBACTERIA TO THE SPECIES LEVEL BY POLYMERASE CHAIN-REACTION AND RESTRICTION ENZYME ANALYSIS [J].
TELENTI, A ;
MARCHESI, F ;
BALZ, M ;
BALLY, F ;
BOTTGER, EC ;
BODMER, T .
JOURNAL OF CLINICAL MICROBIOLOGY, 1993, 31 (02) :175-178
[28]   New variable-number tandem-repeat markers for typing Mycobacterium avium subsp paratuberculosis and M-avium strains:: Comparison with IS900 and IS1245 restriction fragment length polymorphism typing [J].
Thibault, Virginie C. ;
Grayon, Maggy ;
Boschiroli, Maria Laura ;
Hubbans, Christine ;
Overduin, Pieter ;
Stevenson, Karen ;
Gutierrez, Maria Cristina ;
Supply, Philip ;
Biet, Franck .
JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (08) :2404-2410
[29]   Changing Epidemiology of Pulmonary Nontuberculous Mycobacteria Infections [J].
Thomson, Rachel M. .
EMERGING INFECTIOUS DISEASES, 2010, 16 (10) :1576-1583
[30]   Necessity of quality-controlled 16S rRNA gene sequence databases:: Identifying nontuberculous Mycobacterium species [J].
Turenne, CY ;
Tschetter, L ;
Wolfe, J ;
Kabani, A .
JOURNAL OF CLINICAL MICROBIOLOGY, 2001, 39 (10) :3637-3648