Multivariate Normally Distributed Biomarkers Subject to Limits of Detection and Receiver Operating Characteristic Curve Inference

被引:11
作者
Perkins, Neil J. [1 ]
Schisterman, Enrique F. [1 ]
Vexler, Albert [1 ,2 ]
机构
[1] Eunice Kennedy Shriver Natl Inst Child Hlth & Hum, Div Epidemiol Stat & Prevent Res, NIH, DHHS, Rockville, MD 20852 USA
[2] SUNY Buffalo, Dept Biostat, Buffalo, NY 14260 USA
关键词
Area under the curve; left censoring; limit of detection; maximum likelihood; ROC; ROC ANALYSIS; SAMPLES;
D O I
10.1016/j.acra.2013.04.001
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Rationale and Objectives: Biomarkers are of ever-increasing importance to clinical practice and epidemiologic research. Multiple biomarkers are often measured per patient. Measurement of true biomarker levels is limited by laboratory precision, specifically measuring relatively low, or high, biomarker levels resulting in undetectable levels below, or above, a limit of detection (LOD). Ignoring these missing observations or replacing them with a constant are methods commonly used although they have been shown to lead to biased estimates of several parameters of interest, including the area under the receiver operating characteristic (ROC) curve and regression coefficients. Materials and Methods: We developed asymptotically consistent, efficient estimators, via maximum likelihood techniques, for the mean vector and covariance matrix of multivariate normally distributed biomarkers affected by LOD. We also developed an approximation for the Fisher information and covariance matrix for our maximum likelihood estimations (MLEs). We apply these results to an ROC curve setting, generating an MLE for the area under the curve for the best linear combination of multiple biomarkers and accompanying confidence-interval. Results: Point and confidence interval estimates are scrutinized by simulation study, with bias and root mean square error and coverage probability, respectively, displaying behavior consistent with MLEs. An example using three polychlorinated biphenyls to classify women with and without endometriosis illustrates how the underlying distribution of multiple biomarkers with LOD can be assessed and display increased discriminatory ability over naive methods. Conclusions: Properly addressing LODs can lead to optimal biomarker combinations with increased discriminatory ability that may have been ignored because of measurement obstacles.
引用
收藏
页码:838 / 846
页数:9
相关论文
共 25 条
[1]   Applications of ROC Analysis in Medical Research: Recent Developments and Future Directions [J].
Alemayehu, Demissie ;
Zou, Kelly H. .
ACADEMIC RADIOLOGY, 2012, 19 (12) :1457-1464
[2]  
[Anonymous], 2002, Statistical Methods in Diagnostic Medicine
[3]  
[Anonymous], J AM STAT ASSOC, DOI 10.1080/01621459.1993.10476417
[4]  
[Anonymous], 2003, The Statistical Evaluation of Medical Tests for Classification and Prediction
[5]   Procedures for Determination of Detection Limits Application to High-performance Liquid Chromatography Analysis of Fat-soluble Vitamins in Human Serum [J].
Browne, Richard W. ;
Whitcomb, Brian W. .
EPIDEMIOLOGY, 2010, 21 :S4-S9
[6]  
Cooke Paul S., 2001, P257
[8]   ESTIMATION OF AVERAGES IN TRUNCATED SAMPLES [J].
HAAS, CN ;
SCHEFF, PA .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 1990, 24 (06) :912-919
[9]   ASYMPTOTIC VARIANCES AND COVARIANCES OF MAXIMUM-LIKELIHOOD ESTIMATORS FROM CENSORED SAMPLES OF PARAMETERS OF WEIBULL AND GAMMA POPULATIONS [J].
HARTER, HL ;
MOORE, AH .
ANNALS OF MATHEMATICAL STATISTICS, 1967, 38 (02) :557-&
[10]   An Analytic Expression for the Binormal Partial Area under the ROC Curve [J].
Hillis, Stephen L. ;
Metz, Charles E. .
ACADEMIC RADIOLOGY, 2012, 19 (12) :1491-1498