A novel unsupervised spike sorting implementation with variable number of features

被引:0
作者
Chaure, F. J. [1 ,2 ,3 ,4 ]
Quiroga, Quian R. [2 ]
Kochen, S. S. [3 ]
Rey, H. G. [2 ]
机构
[1] UBA, Inst Ingn Biomed, Caba, Argentina
[2] Univ Leicester, Ctr Syst Neurosci, Leicester, Leics, England
[3] CONICET Hosp El Cruce UNAJ, Estudios Neurociencias & Sistemas Complejos, Florencio Varela, Argentina
[4] UBA, Fac Med, Inst Biol Celular & Neurociencias Prof E De Rober, Caba, Argentina
来源
2017 XVII WORKSHOP ON INFORMATION PROCESSING AND CONTROL (RPIC) | 2017年
关键词
neurophysiology; signal processing; spike sorting; LARGE-SCALE; RECORDINGS; NEURONS;
D O I
暂无
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
We propose a new fully automatic spike sorting algorithm that is able to match, or even improve, the performance of semiautomatic solutions with supervised intervention from expert users. We achieved this by incorporating: 1) a set of heuristic criteria inspired by the expert actions following the solution from semiautomatic algorithms, and 2) an improved feature selection method that increases the number of units that can be isolated from a single electrode recording. We evaluated the performance of the proposed method with real and simulated data.
引用
收藏
页数:6
相关论文
共 21 条
  • [1] Nanotools for Neuroscience and Brain Activity Mapping
    Alivisatos, A. Paul
    Andrews, Anne M.
    Boyden, Edward S.
    Chun, Miyoung
    Church, George M.
    Deisseroth, Karl
    Donoghue, John P.
    Fraser, Scott E.
    Lippincott-Schwartz, Jennifer
    Looger, Loren L.
    Masmanidis, Sotiris
    McEuen, Paul L.
    Nurmikko, Arto V.
    Park, Hongkun
    Peterka, Darcy S.
    Reid, Clay
    Roukes, Michael L.
    Scherer, Axel
    Schnitzer, Mark
    Sejnowski, Terrence J.
    Shepard, Kenneth L.
    Tsao, Doris
    Turrigiano, Gina
    Weiss, Paul S.
    Xu, Chris
    Yuste, Rafael
    Zhuang, Xiaowei
    [J]. ACS NANO, 2013, 7 (03) : 1850 - 1866
  • [2] Large-scale, high-density (up to 512 channels) recording of local circuits in behaving animals
    Berenyi, Antal
    Somogyvari, Zoltan
    Nagy, Anett J.
    Roux, Lisa
    Long, John D.
    Fujisawa, Shigeyoshi
    Stark, Eran
    Leonardo, Anthony
    Harris, Timothy D.
    Buzsaki, Gyorgy
    [J]. JOURNAL OF NEUROPHYSIOLOGY, 2014, 111 (05) : 1132 - 1149
  • [3] Bishop C., 2006, Pattern recognition and machine learning, P423
  • [4] Data clustering using a model granular magnet
    Blatt, M
    Wiseman, S
    Domany, E
    [J]. NEURAL COMPUTATION, 1997, 9 (08) : 1805 - 1842
  • [5] Large-scale recording of neuronal ensembles
    Buzsáki, G
    [J]. NATURE NEUROSCIENCE, 2004, 7 (05) : 446 - 451
  • [6] Towards reliable spike-train recordings from thousands of neurons with multielectrodes
    Einevoll, Gaute T.
    Franke, Felix
    Hagen, Espen
    Pouzat, Christophe
    Harris, Kenneth D.
    [J]. CURRENT OPINION IN NEUROBIOLOGY, 2012, 22 (01) : 11 - 17
  • [7] On the origin of the extracellular action potential waveform:: A modeling study
    Gold, C
    Henze, DA
    Koch, C
    Buzsáki, G
    [J]. JOURNAL OF NEUROPHYSIOLOGY, 2006, 95 (05) : 3113 - 3128
  • [8] Accuracy of tetrode spike separation as determined by simultaneous intracellular and extracellular measurements
    Harris, KD
    Henze, DA
    Csicsvari, J
    Hirase, H
    Buzsáki, G
    [J]. JOURNAL OF NEUROPHYSIOLOGY, 2000, 84 (01) : 401 - 414
  • [9] Improving data quality in neuronal population recordings
    Harris, Kenneth D.
    Quiroga, Rodrigo Quian
    Freeman, Jeremy
    Smith, Spencer L.
    [J]. NATURE NEUROSCIENCE, 2016, 19 (09) : 1165 - 1174
  • [10] Intracellular features predicted by extracellular recordings in the hippocampus in vivo
    Henze, DA
    Borhegyi, Z
    Csicsvari, J
    Mamiya, A
    Harris, KD
    Buzsáki, G
    [J]. JOURNAL OF NEUROPHYSIOLOGY, 2000, 84 (01) : 390 - 400