Joint Probabilistic Model of Shape and Intensity for Multiple Abdominal Organ Segmentation From Volumetric CT Images

被引:18
作者
Li, Changyang [1 ]
Wang, Xiuying [1 ]
Li, Junli [2 ]
Eberl, Stefan [3 ,4 ]
Fulham, Michael [3 ,4 ,5 ]
Yin, Yong [6 ]
Feng, David Dagan [3 ,7 ,8 ]
机构
[1] Univ Sydney, Biomed & Multimedia Informat Technol Res Grp, Sch Informat Technol, Sydney, NSW 2006, Australia
[2] Sichuan Normal Univ, Coll Comp Sci, Chengdu 610066, Peoples R China
[3] Univ Sydney, Biomed & Multimedia Informat Technol Res Grp, Sydney, NSW 2006, Australia
[4] Royal Prince Alfred Hosp, Dept Positron Emiss Tomog & Nucl Med, Sydney, NSW 2050, Australia
[5] Univ Sydney, Sydney Med Sch, Sydney, NSW 2006, Australia
[6] Shandong Canc Hosp, Dept Radiat Oncol, Jinan 250117, Peoples R China
[7] Hong Kong Polytech Univ, Dept Elect & Informat Engn, Ctr Multimedia Signal Proc, Hong Kong, Hong Kong, Peoples R China
[8] Shanghai Jia Tong Univ, Med X Res Inst, Shanghai 200030, Peoples R China
基金
澳大利亚研究理事会;
关键词
Computed tomography (CT); expectation maximization (EM); image segmentation; probabilistic principle component analysis (PCA); MAXIMUM-LIKELIHOOD; LIVER SEGMENTATION; FRAMEWORK; ALGORITHMS; ATLAS;
D O I
10.1109/TITB.2012.2227273
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
We propose a novel joint probabilistic model that correlates a new probabilistic shape model with the corresponding global intensity distribution to segment multiple abdominal organs simultaneously. Our probabilistic shape model estimates the probability of an individual voxel belonging to the estimated shape of the object. The probability density of the estimated shape is derived from a combination of the shape variations of target class and the observed shape information. To better capture the shape variations, we used probabilistic principle component analysis optimized by expectation maximization to capture the shape variations and reduce computational complexity. The maximum a posteriori estimation was optimized by the iterated conditional mode-expectation maximization. We used 72 training datasets including low-and high-contrast computed tomography images to construct the shape models for the liver, spleen, and both kidneys. We evaluated our algorithm on 40 test datasets that were grouped into normal (34 normal cases) and pathologic (six datasets) classes. The testing datasets were from different databases and manual segmentation was performed by different clinicians. We measured the volumetric overlap percentage error, relative volume difference, average square symmetric surface distance, false positive rate, and false negative rate and our method achieved accurate and robust segmentation for multiple abdominal organs simultaneously.
引用
收藏
页码:92 / 102
页数:11
相关论文
共 59 条
  • [41] Roweis S, 1998, ADV NEUR IN, V10, P626
  • [42] Sakashita M., 2007, P SPIE, V6514
  • [43] Vascular Active Contour for Vessel Tree Segmentation
    Shang, Yanfeng
    Deklerck, Rudi
    Nyssen, Edgard
    Markova, Aneta
    de Mey, Johan
    Yang, Xin
    Sun, Kun
    [J]. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2011, 58 (04) : 1023 - 1032
  • [44] Medical image segmentation using analysis of isolable-contour maps
    Shiffman, S
    Rubin, GD
    Napel, S
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2000, 19 (11) : 1064 - 1074
  • [45] Soler L., 3D image reconstruction for comparison of algorithm database: A patient specific anatomical and medical image database
  • [46] Challenges for computer-aided diagnosis for CT colonography
    Summers, RM
    [J]. ABDOMINAL IMAGING, 2002, 27 (03): : 268 - 274
  • [47] Thirion J P, 1998, Med Image Anal, V2, P243, DOI 10.1016/S1361-8415(98)80022-4
  • [48] Hybrid Genetic and Variational Expectation-Maximization Algorithm for Gaussian-Mixture-Model-Based Brain MR Image Segmentation
    Tian, GuangJian
    Xia, Yong
    Zhang, Yanning
    Feng, Dagan
    [J]. IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE, 2011, 15 (03): : 373 - 380
  • [49] Probabilistic principal component analysis
    Tipping, ME
    Bishop, CM
    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1999, 61 : 611 - 622
  • [50] A shape-based approach to the segmentation of medical imagery using level sets
    Tsai, A
    Yezzi, A
    Wells, W
    Tempany, C
    Tucker, D
    Fan, A
    Grimson, WE
    Willsky, A
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2003, 22 (02) : 137 - 154