Pharmacoepigenetics in childhood acute lymphoblastic leukemia: involvement of miRNA polymorphisms in hepatotoxicity

被引:11
作者
Gutierrez-Camino, Angela [1 ]
Umerez, Maitane [1 ]
Santos, Borja [1 ]
Martin-Guerrero, Idoia [1 ]
Garcia de Andoin, Nagore [2 ,3 ]
Sastre, Ana [4 ]
Navajas, Aurora [5 ,6 ]
Astigarraga, Itziar [3 ,5 ,6 ]
Garcia-Orad, Africa [1 ,6 ]
机构
[1] Univ Basque Country, UPV EHU, Dept Genet Phys Anthropol & Anim Physiol, Leioa, Spain
[2] Univ Hosp Donostia, Dept Pediat, San Sebastian, Spain
[3] Univ Basque Country, UPV EHU, Dept Pediat, Leioa, Spain
[4] Univ Hosp La Paz, Dept Oncohematol, Madrid, Spain
[5] Univ Hosp Cruces, Dept Pediat, Baracaldo, Spain
[6] BioCruces Hlth Res Inst, Baracaldo, Spain
关键词
chemotherapy; childhood acute lymphoblastic leukemia; hepatotoxicity; methotrexate; miRNAs; SNPs; LIVER-INJURY; GENOME-WIDE; METHOTREXATE; TOXICITY; CHEMOTHERAPY; GENE; SURVIVAL; PHARMACOGENETICS; HOMOCYSTEINE; ASSOCIATION;
D O I
10.2217/epi-2017-0138
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Aim: Hepatotoxicity is one of the most common drug-related toxicities during the treatment of childhood acute lymphoblastic leukemia (ALL). Many genes involved in liver-specific signaling pathways are tightly controlled by miRNAs, and miRNA function could be modulated by SNPs. As a consequence, we hypothesized that variants inmiRNAs could be associated with drug-induced hepatotoxicity. Methods: We analyzed 213 SNPs in 206 miRNAs in a cohort of 179 children with ALL homogeneously treated. Results: rs2648841 in miR-1208 was the most significant SNP during consolidation phase after false discovery rate correction, probably through an effect on its target genes DHFR, MTR and MTHFR. Conclusion: These results point out the possible involvement of SNPs in miRNAs in toxicity to chemotherapy in children with ALL.
引用
收藏
页码:409 / 417
页数:9
相关论文
共 35 条
[1]   Polymorphisms in MIR27A Associated with Early-Onset Toxicity in Fluoropyrimidine-Based Chemotherapy [J].
Amstutz, Ursula ;
Offer, Steven M. ;
Sistonen, Johanna ;
Joerger, Markus ;
Diasio, Robert B. ;
Largiader, Carlo R. .
CLINICAL CANCER RESEARCH, 2015, 21 (09) :2038-2044
[2]  
BENICHOU C, 1990, J HEPATOL, V11, P272
[3]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[4]   DNA variants in the dihydrofolate reductase gene and outcome in childhood ALL [J].
Dulucq, Stephanie ;
St-Onge, Genevieve ;
Gagne, Vincent ;
Ansari, Marc ;
Sinnett, Daniel ;
Labuda, Damian ;
Moghrabi, Albert ;
Krajinovic, Maja .
BLOOD, 2008, 111 (07) :3692-3700
[5]   miRWalk2.0: a comprehensive atlas of microRNA-target interactions [J].
Dweep, Harsh ;
Gretz, Norbert .
NATURE METHODS, 2015, 12 (08) :697-697
[6]   Influence of folate pathway polymorphisms on high-dose methotrexate-related toxicity and survival in childhood acute lymphoblastic leukemia [J].
Erculj, Nina ;
Kotnik, Barbara Faganel ;
Debeljak, Marusa ;
Jazbec, Janez ;
Dolzan, Vita .
LEUKEMIA & LYMPHOMA, 2012, 53 (06) :1096-1104
[7]   Genome-Wide Identification of SNPs in MicroRNA Genes and the SNP Effects on MicroRNA Target Binding and Biogenesis [J].
Gong, Jing ;
Tong, Yin ;
Zhang, Hong-Mei ;
Wang, Kai ;
Hu, Tao ;
Shan, Ge ;
Sun, Jun ;
Guo, An-Yuan .
HUMAN MUTATION, 2012, 33 (01) :254-263
[8]   Polymorphisms in the ABCB1 gene and effect on outcome and toxicity in childhood acute lymphoblastic leukemia [J].
Gregers, J. ;
Green, H. ;
Christensen, I. J. ;
Dalhoff, K. ;
Schroeder, H. ;
Carlsen, N. ;
Rosthoej, S. ;
Lausen, B. ;
Schmiegelow, K. ;
Peterson, C. .
PHARMACOGENOMICS JOURNAL, 2015, 15 (04) :372-379
[9]   The association of reduced folate carrier 80G>A polymorphism to outcome in childhood acute lymphoblastic leukemia interacts with chromosome 21 copy number [J].
Gregers, Jannie ;
Christensen, Ib Jarle ;
Dalhoff, Kim ;
Lausen, Birgitte ;
Schroeder, Henrik ;
Rosthoej, Steen ;
Carlsen, Niels ;
Schmiegelow, Kjeld ;
Peterson, Curt .
BLOOD, 2010, 115 (23) :4671-4677
[10]   The Vienna RNA Websuite [J].
Gruber, Andreas R. ;
Lorenz, Ronny ;
Bernhart, Stephan H. ;
Neuboeck, Richard ;
Hofacker, Ivo L. .
NUCLEIC ACIDS RESEARCH, 2008, 36 :W70-W74