Polarizable Water Models from Mixed Computational and Empirical Optimization

被引:23
作者
Troester, Philipp [1 ]
Lorenzen, Konstantin [1 ]
Schwoerer, Magnus [1 ]
Tavan, Paul [1 ]
机构
[1] Univ Munich, Fak Phys, Lehrstuhl Biomol Opt, D-80538 Munich, Germany
关键词
MOLECULAR-DYNAMICS SIMULATIONS; RADIAL-DISTRIBUTION FUNCTIONS; ADAPTED MULTIPOLE METHOD; LIQUID WATER; DIPOLE-MOMENT; ELECTROSTATIC INTERACTIONS; INCLUDING POLARIZATION; COMPUTER-SIMULATIONS; NEUTRON-DIFFRACTION; FLUCTUATING CHARGE;
D O I
10.1021/jp404548k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Here we suggest a mixed computational and empirical approach serving to optimize the parameters of complex and polarizable molecular mechanics (PMM) models for complicated liquids. The computational part of the parameter optimization relies on hybrid calculations combining density functional theory (DFT) for a solute molecule with a PMM treatment of its solvent environment at well-defined thermodynamic conditions. As an application we have developed PMM models for water featuring v = 3, 4, and 5 points of force action, a Gaussian inducible dipole and a Buckingham potential at the oxygen, the experimental liquid phase geometry, the experimental gas phase polarizability alpha(g)(exp) = 1.47 angstrom(3), and, for v = 4 and 5, the gas phase value mu(g)(exp)= 1.855 D for the static dipole moment. The widths of the Gaussian dipoles and, for v = 4 and 5, also the electrostatic geometries of these so-called TLvP models are derived from self-consistent DFT/PMM calculations, and the parameters of the Buckingham potentials (and the static TL3P dipole moment) are estimated from molecular dynamics (MD) simulations. The high quality of the resulting models is demonstrated for the observables targeted during optimization (potential energy per molecule, pressure, radial distribution functions) and a series of predicted properties (quadrupole moments, density at constant pressure, dielectric constant, diffusivity, viscosity, compressibility, heat capacity) at certain standard conditions. Remaining deficiencies and possible ways for their removal are discussed.
引用
收藏
页码:9486 / 9500
页数:15
相关论文
共 121 条
[1]   A general purpose model for the condensed phases of water: TIP4P/2005 [J].
Abascal, JLF ;
Vega, C .
JOURNAL OF CHEMICAL PHYSICS, 2005, 123 (23)
[2]  
Allen MP, 1987, COMPUTER SIMULATIONS, DOI DOI 10.2307/2938686
[3]   Polarization Effects Stabilize Bacteriorhodopsin's Chromophore Binding Pocket: A Molecular Dynamics Study [J].
Babitzki, G. ;
Denschlag, R. ;
Tavan, P. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2009, 113 (30) :10483-10495
[4]   Electron distribution in water [J].
Badyal, YS ;
Saboungi, ML ;
Price, DL ;
Shastri, SD ;
Haeffner, DR ;
Soper, AK .
JOURNAL OF CHEMICAL PHYSICS, 2000, 112 (21) :9206-9208
[5]   Polarizable model of water with field-dependent polarization [J].
Baranyai, Andras ;
Kiss, Peter T. .
JOURNAL OF CHEMICAL PHYSICS, 2011, 135 (23)
[6]   A transferable classical potential for the water molecule [J].
Baranyai, Andras ;
Kiss, Peter T. .
JOURNAL OF CHEMICAL PHYSICS, 2010, 133 (14)
[7]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[8]  
Berendsen HJ, 1981, Interaction models for water in relation to protein hydration, DOI DOI 10.1007/978-94-015-7658-1_21
[9]   THE MISSING TERM IN EFFECTIVE PAIR POTENTIALS [J].
BERENDSEN, HJC ;
GRIGERA, JR ;
STRAATSMA, TP .
JOURNAL OF PHYSICAL CHEMISTRY, 1987, 91 (24) :6269-6271
[10]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690