DENSITY-FUNCTIONAL THEORY;
QUANTUM-CHEMICAL METHODS;
ACCURATE ENERGY RANKING;
DIPOLE DISPERSION MODEL;
SMALL ORGANIC-MOLECULES;
BASIS-SET;
HARTREE-FOCK;
GAUSSIAN-1;
THEORY;
BLIND TEST;
ENANTIOPURE;
D O I:
10.1021/acs.jctc.7b01179
中图分类号:
O64 [物理化学(理论化学)、化学物理学];
学科分类号:
070304 ;
081704 ;
摘要:
Molecular crystal structure prediction (CSP) requires evaluating differences in lattice energy between candidate crystal structures accurately and efficiently. In this work, we explore and compare several low-cost alternatives to dispersion-corrected density-functional theory (DFT) in the plane-waves/pseudopotential approximation, the most accurate and general approach used for CSP at present. Three types of low-cost methods are considered: DFT with a small basis set of finite-support numerical orbitals (the SIESTA method), dispersion-corrected Gaussian small or minimal-basis-set Hartree-Fock and DFT with additional empirical corrections (HF-3c and PBEh-3c), and self-consistent-charge dispersion-corrected density-functional tight binding (SCC-DFTB3-D3). In addition, we study the performance of composite methods that comprise a geometry optimization using a low-cost approach followed by a single-point calculation using the accurate but comparatively expensive B86bPBE-XDM functional. All methods were tested for their abilities to produce absolute lattice energies, relative lattice energies, and crystal geometries. We show that assessing various methods by their ability to produce absolute lattice energies can be misleading and that relative lattice energies are a much better indicator of performance in CSP. The EE14 set of relative solubilities of homochiral and heterochiral chiral crystals is proposed for relative lattice-energy benchmarking. Our results show that PBE-D2 plus a DZP basis set of numerical orbitals coupled with a final B86bPBE-XDM single-point calculation gives excellent performance at a fraction of the cost of a full B86bPBE-XDM calculation, although the results are sensitive to the particular details of the computational protocol. The B86bPBE-XDM//PBE-D2/DZP method was subsequently tested in a practical CSP application from our recent work on the crystal structure of the enantiopure and racemate forms of 1-aza[6]helicene, a chiral organic semiconductor. Our results show that this multilevel method is able to correctly reproduce the energy ranking of both crystal forms.
机构:
Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Bardwell, David A.
Adjiman, Claire S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Adjiman, Claire S.
Arnautova, Yelena A.
论文数: 0引用数: 0
h-index: 0
机构:
Cornell Univ, Ithaca, NY 14853 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Arnautova, Yelena A.
Bartashevich, Ekaterina
论文数: 0引用数: 0
h-index: 0
机构:
S Ural State Univ, Lenina, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Bartashevich, Ekaterina
Boerrigter, Stephan X. M.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Boerrigter, Stephan X. M.
Braun, Doris E.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Braun, Doris E.
Cruz-Cabeza, Aurora J.
论文数: 0引用数: 0
h-index: 0
机构:
Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Univ Cambridge, Univ Chem Lab, Pfizer Inst Pharmaceut Mat Sci, Cambridge CB2 1TN, England
Univ Amsterdam, NL-1012 WX Amsterdam, NetherlandsCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Cruz-Cabeza, Aurora J.
Day, Graeme M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Chem, Cambridge CB2 1TN, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Day, Graeme M.
Della Valle, Raffaele G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bologna, I-40126 Bologna, ItalyCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Della Valle, Raffaele G.
Desiraju, Gautam R.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Desiraju, Gautam R.
van Eijck, Bouke P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utrecht, NL-3508 TC Utrecht, NetherlandsCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
van Eijck, Bouke P.
Facelli, Julio C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Ctr High Performance Comp, Salt Lake City, UT 84112 USA
Univ Utah, Dept Biomed Informat, Salt Lake City, UT 84112 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Facelli, Julio C.
Ferraro, Marta B.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, RA-1053 Buenos Aires, DF, ArgentinaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Ferraro, Marta B.
Grillo, Damian
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, RA-1053 Buenos Aires, DF, ArgentinaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Grillo, Damian
Habgood, Matthew
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Habgood, Matthew
Hofmann, Detlef W. M.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Hofmann, Detlef W. M.
Hofmann, Fridolin
论文数: 0引用数: 0
h-index: 0
机构:
Univ Erlangen Nurnberg, D-8520 Erlangen, GermanyCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Hofmann, Fridolin
Jose, K. V. Jovan
论文数: 0引用数: 0
h-index: 0
机构:
Ruhr Univ Bochum, Bochum, GermanyCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Jose, K. V. Jovan
Karamertzanis, Panagiotis G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Karamertzanis, Panagiotis G.
Kazantsev, Andrei V.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Kazantsev, Andrei V.
Kendrick, John
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bradford, Bradford BD7 1DP, W Yorkshire, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Kendrick, John
Kuleshova, Liudmila N.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Kuleshova, Liudmila N.
Leusen, Frank J. J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bradford, Bradford BD7 1DP, W Yorkshire, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Leusen, Frank J. J.
Maleev, Andrey V.
论文数: 0引用数: 0
h-index: 0
机构:
Vladimir State Humanitarian Univ, Vladimir, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Maleev, Andrey V.
Misquitta, Alston J.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Misquitta, Alston J.
Mohamed, Sharmarke
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Mohamed, Sharmarke
Needs, Richard J.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Needs, Richard J.
Neumann, Marcus A.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Neumann, Marcus A.
Nikylov, Denis
论文数: 0引用数: 0
h-index: 0
机构:
S Ural State Univ, Lenina, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Nikylov, Denis
Orendt, Anita M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Ctr High Performance Comp, Salt Lake City, UT 84112 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Orendt, Anita M.
Pal, Rumpa
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Pal, Rumpa
Pantelides, Constantinos C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Pantelides, Constantinos C.
Pickard, Chris J.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Phys & Astron, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Pickard, Chris J.
Price, Louise S.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Price, Louise S.
Price, Sarah L.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Price, Sarah L.
Scheraga, Harold A.
论文数: 0引用数: 0
h-index: 0
机构:
Cornell Univ, Ithaca, NY 14853 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Scheraga, Harold A.
van de Streek, Jacco
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
van de Streek, Jacco
Thakur, Tejender S.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Thakur, Tejender S.
Tiwari, Siddharth
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Tiwari, Siddharth
论文数: 引用数:
h-index:
机构:
Venuti, Elisabetta
Zhitkov, Ilia K.
论文数: 0引用数: 0
h-index: 0
机构:
Vladimir State Humanitarian Univ, Vladimir, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
机构:
Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Bardwell, David A.
Adjiman, Claire S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Adjiman, Claire S.
Arnautova, Yelena A.
论文数: 0引用数: 0
h-index: 0
机构:
Cornell Univ, Ithaca, NY 14853 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Arnautova, Yelena A.
Bartashevich, Ekaterina
论文数: 0引用数: 0
h-index: 0
机构:
S Ural State Univ, Lenina, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Bartashevich, Ekaterina
Boerrigter, Stephan X. M.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Boerrigter, Stephan X. M.
Braun, Doris E.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Braun, Doris E.
Cruz-Cabeza, Aurora J.
论文数: 0引用数: 0
h-index: 0
机构:
Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Univ Cambridge, Univ Chem Lab, Pfizer Inst Pharmaceut Mat Sci, Cambridge CB2 1TN, England
Univ Amsterdam, NL-1012 WX Amsterdam, NetherlandsCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Cruz-Cabeza, Aurora J.
Day, Graeme M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Chem, Cambridge CB2 1TN, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Day, Graeme M.
Della Valle, Raffaele G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bologna, I-40126 Bologna, ItalyCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Della Valle, Raffaele G.
Desiraju, Gautam R.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Desiraju, Gautam R.
van Eijck, Bouke P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utrecht, NL-3508 TC Utrecht, NetherlandsCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
van Eijck, Bouke P.
Facelli, Julio C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Ctr High Performance Comp, Salt Lake City, UT 84112 USA
Univ Utah, Dept Biomed Informat, Salt Lake City, UT 84112 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Facelli, Julio C.
Ferraro, Marta B.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, RA-1053 Buenos Aires, DF, ArgentinaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Ferraro, Marta B.
Grillo, Damian
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, RA-1053 Buenos Aires, DF, ArgentinaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Grillo, Damian
Habgood, Matthew
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Habgood, Matthew
Hofmann, Detlef W. M.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Hofmann, Detlef W. M.
Hofmann, Fridolin
论文数: 0引用数: 0
h-index: 0
机构:
Univ Erlangen Nurnberg, D-8520 Erlangen, GermanyCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Hofmann, Fridolin
Jose, K. V. Jovan
论文数: 0引用数: 0
h-index: 0
机构:
Ruhr Univ Bochum, Bochum, GermanyCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Jose, K. V. Jovan
Karamertzanis, Panagiotis G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Karamertzanis, Panagiotis G.
Kazantsev, Andrei V.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Kazantsev, Andrei V.
Kendrick, John
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bradford, Bradford BD7 1DP, W Yorkshire, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Kendrick, John
Kuleshova, Liudmila N.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Kuleshova, Liudmila N.
Leusen, Frank J. J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bradford, Bradford BD7 1DP, W Yorkshire, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Leusen, Frank J. J.
Maleev, Andrey V.
论文数: 0引用数: 0
h-index: 0
机构:
Vladimir State Humanitarian Univ, Vladimir, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Maleev, Andrey V.
Misquitta, Alston J.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Misquitta, Alston J.
Mohamed, Sharmarke
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Mohamed, Sharmarke
Needs, Richard J.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Needs, Richard J.
Neumann, Marcus A.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Neumann, Marcus A.
Nikylov, Denis
论文数: 0引用数: 0
h-index: 0
机构:
S Ural State Univ, Lenina, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Nikylov, Denis
Orendt, Anita M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Ctr High Performance Comp, Salt Lake City, UT 84112 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Orendt, Anita M.
Pal, Rumpa
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Pal, Rumpa
Pantelides, Constantinos C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ London Imperial Coll Sci Technol & Med, London SW7 2AZ, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Pantelides, Constantinos C.
Pickard, Chris J.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Phys & Astron, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Pickard, Chris J.
Price, Louise S.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Price, Louise S.
Price, Sarah L.
论文数: 0引用数: 0
h-index: 0
机构:
UCL, Dept Chem, London WC1E 6BT, EnglandCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Price, Sarah L.
Scheraga, Harold A.
论文数: 0引用数: 0
h-index: 0
机构:
Cornell Univ, Ithaca, NY 14853 USACambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Scheraga, Harold A.
van de Streek, Jacco
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
van de Streek, Jacco
Thakur, Tejender S.
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Thakur, Tejender S.
Tiwari, Siddharth
论文数: 0引用数: 0
h-index: 0
机构:Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
Tiwari, Siddharth
论文数: 引用数:
h-index:
机构:
Venuti, Elisabetta
Zhitkov, Ilia K.
论文数: 0引用数: 0
h-index: 0
机构:
Vladimir State Humanitarian Univ, Vladimir, RussiaCambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England