Temperature Integration: An efficient procedure for calculation of free energy differences

被引:3
作者
Farhi, Asaf [1 ]
Hed, Guy [1 ,2 ]
Bon, Michael [3 ]
Caticha, Nestor [4 ]
Mak, Chi H. [5 ]
Domany, Eytan [1 ]
机构
[1] Weizmann Inst Sci, Dept Phys, IL-76100 Rehovot, Israel
[2] Ctr Educ Technol, IL-61397 Tel Aviv, Israel
[3] CEA Saclay, CNRS, Inst Phys Theor, F-91191 Gif Sur Yvette, France
[4] Univ Sao Paulo, Inst Phys, Sao Paulo, Brazil
[5] Univ So Calif, Dept Chem, Los Angeles, CA 90089 USA
基金
美国国家科学基金会;
关键词
Free energy difference; Equilibrium method; Alchemical free energy; Temperature Integration; Parallel Tempering; Cutoff; PARALLEL TEMPERING SIMULATIONS; REPLICA-EXCHANGE METHOD;
D O I
10.1016/j.physa.2013.07.036
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We propose a method, Temperature Integration, which allows an efficient calculation of free energy differences between two systems of interest, with the same degrees of freedom, which may have rough energy landscapes. The method is based on calculating, for each single system, the difference between the values of In Z at two temperatures, using a Parallel Tempering procedure. If our two systems of interest have the same phase space volume, they have the same values of In Z at high-T, and we can obtain the free energy difference between them, using the two single-system calculations described above. If the phase space volume of a system is known, our method can be used to calculate its absolute (versus relative) free energy as well. We apply our method and demonstrate its efficiency on a "toy model" of hard rods on a 1-dimensional ring. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:5836 / 5844
页数:9
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