Quantification of non-Markovian effects in the Fenna-Matthews-Olson complex

被引:29
作者
Mujica-Martinez, C. A. [1 ]
Nalbach, P. [1 ]
Thorwart, M. [1 ]
机构
[1] Univ Hamburg, Inst Theoret Phys 1, D-20355 Hamburg, Germany
关键词
TEMPERATURE-DEPENDENT ABSORPTION; FMO ANTENNA PROTEIN; QUANTUM COHERENCE; ENERGY-TRANSFER; ELECTRONIC COHERENCE; EXCITON DYNAMICS; SYSTEM; DENSITY; SPECTROSCOPY; RELAXATION;
D O I
10.1103/PhysRevE.88.062719
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
The excitation energy transfer dynamics in the Fenna-Matthews-Olson complex is quantified in terms of a non-Markovianity measure based on the time evolution of the trace distance of two quantum states. We use a system description derived from experiments and different environmental fluctuation spectral functions, which are obtained either from experimental data or from molecular dynamics simulations. These exhibit, in all cases, a nontrivial structure with several peaks attributed to vibrational modes of the pigment-protein complex. Such a structured environmental spectrum can, in principle, give rise to strong non-Markovian effects. We present numerically exact real-time path-integral calculations for the transfer dynamics and find, in all cases, a monotonic decrease of the trace distance with increasing time which renders a Markovian description valid.
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页数:10
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共 74 条
[1]   How proteins trigger excitation energy transfer in the FMO complex of green sulfur bacteria [J].
Adolphs, Julia ;
Renger, Thomas .
BIOPHYSICAL JOURNAL, 2006, 91 (08) :2778-2797
[2]   The FMO Complex in a Glycerol-Water Mixture [J].
Aghtar, Mortaza ;
Struempfer, Johan ;
Othrich, Carsten ;
Schulten, Klaus ;
Kleinekathoefer, Ulrich .
JOURNAL OF PHYSICAL CHEMISTRY B, 2013, 117 (24) :7157-7163
[3]   Memory-keeping effects and forgetfulness in the dynamics of a qubit coupled to a spin chain [J].
Apollaro, Tony J. G. ;
Di Franco, Carlo ;
Plastina, Francesco ;
Paternostro, Mauro .
PHYSICAL REVIEW A, 2011, 83 (03)
[4]   Foundations and measures of quantum non-Markovianity [J].
Breuer, Heinz-Peter .
JOURNAL OF PHYSICS B-ATOMIC MOLECULAR AND OPTICAL PHYSICS, 2012, 45 (15)
[5]   Measure for the Degree of Non-Markovian Behavior of Quantum Processes in Open Systems [J].
Breuer, Heinz-Peter ;
Laine, Elsi-Mari ;
Piilo, Jyrki .
PHYSICAL REVIEW LETTERS, 2009, 103 (21)
[6]   Two-dimensional spectroscopy of electronic couplings in photosynthesis [J].
Brixner, T ;
Stenger, J ;
Vaswani, HM ;
Cho, M ;
Blankenship, RE ;
Fleming, GR .
NATURE, 2005, 434 (7033) :625-628
[7]   The Eighth Bacteriochlorophyll Completes the Excitation Energy Funnel in the FMO Protein [J].
Busch, Marcel Schmidt Am ;
Mueh, Frank ;
Madjet, Mohamed El-Amine ;
Renger, Thomas .
JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2011, 2 (02) :93-98
[8]   Dynamics of Light Harvesting in Photosynthesis [J].
Cheng, Yuan-Chung ;
Fleming, Graham R. .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2009, 60 :241-262
[9]   Enhancement of Vibronic and Ground-State Vibrational Coherences in 2D Spectra of Photosynthetic Complexes [J].
Chenu, Aurelia ;
Christensson, Niklas ;
Kauffmann, Harald F. ;
Mancal, Tomas .
SCIENTIFIC REPORTS, 2013, 3
[10]   The role of non-equilibrium vibrational structures in electronic coherence and recoherence in pigment-protein complexes [J].
Chin, A. W. ;
Prior, J. ;
Rosenbach, R. ;
Caycedo-Soler, F. ;
Huelga, S. F. ;
Plenio, M. B. .
NATURE PHYSICS, 2013, 9 (02) :113-118