ISA-Net: Improved spatial attention network for PET-CT tumor segmentation

被引:11
|
作者
Huang, Zhengyong [1 ,2 ]
Zou, Sijuan [3 ]
Wang, Guoshuai [1 ,2 ]
Chen, Zixiang [1 ,4 ]
Shen, Hao [1 ,2 ]
Wang, Haiyan [1 ,2 ]
Zhang, Na [1 ,4 ]
Zhang, Lu [5 ,6 ]
Yang, Fan [5 ,6 ]
Wang, Haining [7 ]
Liang, Dong [1 ,4 ]
Niu, Tianye [8 ]
Zhu, Xiaohua [3 ]
Hu, Zhanli [1 ,4 ]
机构
[1] Chinese Acad Sci, Shenzhen Inst Adv Technol, Lauterbur Res Ctr Biomed Imaging, Shenzhen 518055, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 101408, Peoples R China
[3] Huazhong Univ Sci & Technol, Tongji Hosp, Tongji Med Coll, Dept Nucl Med & PET, Wuhan 430000, Peoples R China
[4] Chinese Acad Sci, Key Lab Hlth Informat, Shenzhen 518055, Peoples R China
[5] Chinese Acad Sci, Brain Cognit & Brain Dis Inst BCBDI, Shenzhen Inst Adv Technol, Shenzhen 518055, Peoples R China
[6] Shenzhen Fundamental Res Inst, Shenzhen Hong Kong Inst Brain Sci, Shenzhen 518055, Peoples R China
[7] United Imaging Res Inst Innovat Med Equipment, Shenzhen 518045, Peoples R China
[8] Shenzhen Bay Lab, Inst Biomed Engn, Shenzhen 518118, Peoples R China
基金
中国国家自然科学基金;
关键词
Tumor segmentation; Multimodal PET -CT; Deep learning; Attention network; VOLUME;
D O I
10.1016/j.cmpb.2022.107129
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Background and Objective: Achieving accurate and automated tumor segmentation plays an important role in both clinical practice and radiomics research. Segmentation in medicine is now often performed manually by experts, which is a laborious, expensive and error-prone task. Manual annotation relies heav-ily on the experience and knowledge of these experts. In addition, there is much intra-and interobserver variation. Therefore, it is of great significance to develop a method that can automatically segment tu-mor target regions. Methods: In this paper, we propose a deep learning segmentation method based on multimodal positron emission tomography-computed tomography (PET-CT), which combines the high sensitivity of PET and the precise anatomical information of CT. We design an improved spatial atten-tion network(ISA-Net) to increase the accuracy of PET or CT in detecting tumors, which uses multi-scale convolution operation to extract feature information and can highlight the tumor region location informa-tion and suppress the non-tumor region location information. In addition, our network uses dual-channel inputs in the coding stage and fuses them in the decoding stage, which can take advantage of the differ-ences and complementarities between PET and CT. Results: We validated the proposed ISA-Net method on two clinical datasets, a soft tissue sarcoma(STS) and a head and neck tumor(HECKTOR) dataset, and compared with other attention methods for tumor segmentation. The DSC score of 0.8378 on STS dataset and 0.8076 on HECKTOR dataset show that ISA-Net method achieves better segmentation performance and has better generalization. Conclusions: The method proposed in this paper is based on multi-modal medical image tumor segmentation, which can effectively utilize the difference and complementarity of different modes. The method can also be applied to other multi-modal data or single-modal data by proper adjustment.(c) 2022 Elsevier B.V. All rights reserved.
引用
收藏
页数:9
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