Training machine learning models with synthetic data improves the prediction of ventricular origin in outflow tract ventricular arrhythmias

被引:12
作者
Doste, Ruben [1 ]
Lozano, Miguel [2 ]
Jimenez-Perez, Guillermo [3 ]
Mont, Lluis [4 ]
Berruezo, Antonio [5 ]
Penela, Diego [5 ]
Camara, Oscar [3 ]
Sebastian, Rafael [2 ]
机构
[1] Univ Oxford, Dept Comp Sci, Oxford, England
[2] Univ Valencia, Dept Comp Sci, Comp Multiscale Simulat Lab CoMMLab, Valencia, Spain
[3] Univ Pompeu Fabra, Dept Informat & Commun Technol, Physense, BCN Medtech, Barcelona, Spain
[4] Univ Barcelona, Hosp Clin, Cardiovasc Clin Inst, Cardiol Dept,Arrhythmia Sect, Barcelona, Spain
[5] Heart Inst, Teknon Med Ctr, Cardiol Dept, Barcelona, Spain
关键词
machine learning; electrophysiological simulations; outflow tract ventricular arrhythmias; synthetic database; virtual population; digital twin; ARTIFICIAL-INTELLIGENCE; DIAGNOSIS; ABLATION;
D O I
10.3389/fphys.2022.909372
中图分类号
Q4 [生理学];
学科分类号
071003 ;
摘要
In order to determine the site of origin (SOO) in outflow tract ventricular arrhythmias (OTVAs) before an ablation procedure, several algorithms based on manual identification of electrocardiogram (ECG) features, have been developed. However, the reported accuracy decreases when tested with different datasets. Machine learning algorithms can automatize the process and improve generalization, but their performance is hampered by the lack of large enough OTVA databases. We propose the use of detailed electrophysiological simulations of OTVAs to train a machine learning classification model to predict the ventricular origin of the SOO of ectopic beats. We generated a synthetic database of 12-lead ECGs (2,496 signals) by running multiple simulations from the most typical OTVA SOO in 16 patient-specific geometries. Two types of input data were considered in the classification, raw and feature ECG signals. From the simulated raw 12-lead ECG, we analyzed the contribution of each lead in the predictions, keeping the best ones for the training process. For feature-based analysis, we used entropy-based methods to rank the obtained features. A cross-validation process was included to evaluate the machine learning model. Following, two clinical OTVA databases from different hospitals, including ECGs from 365 patients, were used as test-sets to assess the generalization of the proposed approach. The results show that V2 was the best lead for classification. Prediction of the SOO in OTVA, using both raw signals or features for classification, presented high accuracy values (> 0.96). Generalization of the network trained on simulated data was good for both patient datasets (accuracy of 0.86 and 0.84, respectively) and presented better values than using exclusively real ECGs for classification (accuracy of 0.84 and 0.76 for each dataset). The use of simulated ECG data for training machine learning-based classification algorithms is critical to obtain good SOO predictions in OTVA compared to real data alone. The fast implementation and generalization of the proposed methodology may contribute towards its application to a clinical routine.
引用
收藏
页数:15
相关论文
共 46 条
  • [1] Learning Domain Shift in Simulated and Clinical Data: Localizing the Origin of Ventricular Activation From 12-Lead Electrocardiograms
    Alawad, Mohammed
    Wang, Linwei
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2019, 38 (05) : 1172 - 1184
  • [2] Differentiating Right- and Left-Sided Outflow Tract Ventricular Arrhythmias: Classical ECG Signatures and Prediction Algorithms
    Anderson, Robert D.
    Kumar, Saurabh
    Parameswaran, Ramanathan
    Wong, Geoffrey
    Voskoboinik, Aleksandr
    Sugumar, Hariharan
    Watts, Troy
    Sparks, Paul B.
    Morton, Joseph B.
    McLellan, Alex
    Kistler, Peter M.
    Kalman, Jonathan
    Lee, Geoffrey
    [J]. CIRCULATION-ARRHYTHMIA AND ELECTROPHYSIOLOGY, 2019, 12 (06)
  • [3] Application of artificial intelligence to the electrocardiogram
    Attia, Zachi, I
    Harmon, David M.
    Behr, Elijah R.
    Friedman, Paul A.
    [J]. EUROPEAN HEART JOURNAL, 2021, 42 (46) : 4717 - +
  • [4] Effects of material properties and geometry on electrocardiographic forward simulations
    Bradley, CP
    Pullan, AJ
    Hunter, PJ
    [J]. ANNALS OF BIOMEDICAL ENGINEERING, 2000, 28 (07) : 721 - 741
  • [5] Estimation of Purkinje trees from electro-anatomical mapping of the left ventricle using minimal cost geodesics
    Cardenes, Ruben
    Sebastian, Rafael
    Soto-Iglesias, David
    Berruezo, Antonio
    Camara, Oscar
    [J]. MEDICAL IMAGE ANALYSIS, 2015, 24 (01) : 52 - 62
  • [6] Human ventricular activation sequence and the simulation of the electrocardiographic QRS complex and its variability in healthy and intraventricular block conditions
    Cardone-Noott, Louie
    Bueno-Orovio, Alfonso
    Minchole, Ana
    Zemzemi, Nejib
    Rodriguez, Blanca
    [J]. EUROPACE, 2016, 18 : 4 - 15
  • [7] The 'Digital Twin' to enable the vision of precision cardiology
    Corral-Acero, Jorge
    Margara, Francesca
    Marciniak, Maciej
    Rodero, Cristobal
    Loncaric, Filip
    Feng, Yingjing
    Gilbert, Andrew
    Fernandes, Joao F.
    Bukhari, Hassaan A.
    Wajdan, Ali
    Martinez, Manuel Villegas
    Santos, Mariana Sousa
    Shamohammdi, Mehrdad
    Luo, Hongxing
    Westphal, Philip
    Leeson, Paul
    DiAchille, Paolo
    Gurev, Viatcheslav
    Mayr, Manuel
    Geris, Liesbet
    Pathmanathan, Pras
    Morrison, Tina
    Cornelussen, Richard
    Prinzen, Frits
    Delhaas, Tammo
    Doltra, Ada
    Sitges, Marta
    Vigmond, Edward J.
    Zacur, Ernesto
    Grau, Vicente
    Rodriguez, Blanca
    Remme, Espen W.
    Niederer, Steven
    Mortier, Peter
    McLeod, Kristin
    Potse, Mark
    Pueyo, Esther
    Bueno-Orovio, Alfonso
    Lamata, Pablo
    [J]. EUROPEAN HEART JOURNAL, 2020, 41 (48) : 4556 - +
  • [8] Machine learning in drug development: Characterizing the effect of 30 drugs on the QT interval using Gaussian process regression, sensitivity analysis, and uncertainty quantification
    Costabal, Francisco Sahli
    Matsuno, Kristen
    Yao, Jiang
    Perdikaris, Paris
    Kuhl, Ellen
    [J]. COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2019, 348 : 313 - 333
  • [9] Cristianini N., 2000, INTRO SUPPORT VECTOR
  • [10] In silico pace-mapping: prediction of left vs. right outflow tract origin in idiopathic ventricular arrhythmias with patient-specific electrophysiological simulations
    Doste, Ruben
    Sebastian, Rafael
    Francisco Gomez, Juan
    Soto-Iglesias, David
    Alcaine, Alejandro
    Mont, Lluis
    Berruezo, Antonio
    Penela, Diego
    Camara, Oscar
    [J]. EUROPACE, 2020, 22 (09): : 1419 - 1430