Equivalence of trans paths in ion channels

被引:17
作者
Alvarez, J
Hajek, B
机构
[1] Univ Saskatchewan, Math Sci Grp, Saskatoon, SK S7N 5E6, Canada
[2] Univ Illinois, Dept Elect & Comp Engn, Urbana, IL 61801 USA
[3] Univ Illinois, Coordinated Sci Lab, Urbana, IL 61801 USA
来源
PHYSICAL REVIEW E | 2006年 / 73卷 / 04期
关键词
D O I
10.1103/PhysRevE.73.046126
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
We explore stochastic models for the study of ion transport in biological cells. Analysis of these models explains and explores an interesting feature of ion transport observed by biophysicists. Namely, the average time it takes ions to cross certain ion channels is the same in either direction, even if there is an electric potential difference across the channels. It is shown for simple single ion models that the distribution of a path (i.e., the history of location versus time) of an ion crossing the channel in one direction has the same distribution as the time-reversed path of an ion crossing the channel in the reverse direction. Therefore, not only is the mean duration of these paths equal, but other measures, such as the variance of passage time or the mean time a path spends within a specified section of the channel, are also the same for both directions of traversal. The feature is also explored for channels with interacting ions. If a system of interacting ions is in reversible equilibrium (net flux is zero), then the equivalence of the left-to-right trans paths with the time-reversed right-to-left trans paths still holds. However, if the system is in equilibrium, but not reversible equilibrium, then such equivalence need not hold.
引用
收藏
页数:12
相关论文
共 43 条
[1]  
ALVAREZ J, 2004, THESIS U ILLINOIS UR
[2]  
[Anonymous], 1999, MARKOV CHAINS
[3]  
[Anonymous], 1979, Reversibility and Stochastic Networks
[4]   BROWNIAN DYNAMICS STUDY OF A MULTIPLY-OCCUPIED CATION CHANNEL - APPLICATION TO UNDERSTANDING PERMEATION IN POTASSIUM CHANNELS [J].
BEK, S ;
JAKOBSSON, E .
BIOPHYSICAL JOURNAL, 1994, 66 (04) :1028-1038
[5]   Channel-facilitated membrane transport: Average lifetimes in the channel [J].
Berezhkovskii, AM ;
Pustovoit, MA ;
Bezrukov, SM .
JOURNAL OF CHEMICAL PHYSICS, 2003, 119 (07) :3943-3951
[6]   Recent advances in ion channel research [J].
Chung, SH ;
Kuyucak, S .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2002, 1565 (02) :267-286
[7]   THE THEORY OF ION-TRANSPORT THROUGH MEMBRANE CHANNELS [J].
COOPER, K ;
JAKOBSSON, E ;
WOLYNES, P .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 1985, 46 (01) :51-96
[8]   Tests of continuum theories as models of ion channels. II. Poisson-Nernst-Planck theory versus Brownian dynamics [J].
Corry, B ;
Kuyucak, S ;
Chung, SH .
BIOPHYSICAL JOURNAL, 2000, 78 (05) :2364-2381
[9]   Ionic channels in biological membranes - electrostatic analysis of a natural nanotube [J].
Eisenberg, B .
CONTEMPORARY PHYSICS, 1998, 39 (06) :447-466
[10]   DIFFUSION AS A CHEMICAL-REACTION - STOCHASTIC TRAJECTORIES BETWEEN FIXED CONCENTRATIONS [J].
EISENBERG, RS ;
KLOSEK, MM ;
SCHUSS, Z .
JOURNAL OF CHEMICAL PHYSICS, 1995, 102 (04) :1767-1780