Marsupials in the Age of Genomics

被引:24
作者
Graves, Jennifer A. Marshall [1 ,2 ,3 ]
Renfree, Marilyn B. [3 ]
机构
[1] La Trobe Univ, La Trobe Inst Mol Sci, Melbourne, Vic 3186, Australia
[2] Australian Natl Univ, Res Sch Biol, Canberra, ACT 2060, Australia
[3] Univ Melbourne, Dept Zool, Melbourne, Vic 3010, Australia
来源
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 14 | 2013年 / 14卷
关键词
tammar wallaby; short-tailed opossum; marsupial reproduction and development; chromosome evolution; sex chromosomes; epigenetics; X-CHROMOSOME INACTIVATION; MAMMALIAN Y-CHROMOSOME; SHORT-TAILED OPOSSUM; GENETIC-LINKAGE MAP; TAMMAR WALLABY; TASMANIAN DEVIL; MACROPUS-EUGENII; EXPRESSION; EVOLUTION; REVEALS;
D O I
10.1146/annurev-genom-091212-153452
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Marsupials are "alternative mammals" that differ from eutherians most spectacularly in their mode of reproduction and sexual differentiation. They represent a 160-million-year-old isolate from the more numerous eutherians, making them particularly valuable for comparative genome studies that enlarge and enhance our understanding of the function and evolution of the mammalian genome. The genomes of three sequenced marsupial species are similar in size to those of mice and humans but show informative differences in base composition and repetitive elements. Small differences in gene sets and gene families between marsupials and eutherians may relate to physiological and environmental differences. Marsupial karyotypes are highly conserved in chromosome numbers, sizes, and G-banding patterns, and an ancestor with a 2n = 14 karyotype can be deduced. Marsupial sex chromosomes, partly homologous to those of eutherians, represent the ancestral therian XY pair. Epigenetic regulation of X inactivation in marsupials differs markedly from that of eutherians and has apparently retained an ancient silencing mechanism. Genomic imprinting of a smaller set of genes occurs in the marsupial placenta and, uniquely, in the mammary gland.
引用
收藏
页码:393 / 420
页数:28
相关论文
共 137 条
[1]   A cross-species comparison of escape from X inactivation in Eutheria: implications for evolution of X chromosome inactivation [J].
Al Nadaf, Shafagh ;
Deakin, Janine E. ;
Gilbert, Clement ;
Robinson, Terence J. ;
Graves, Jennifer A. M. ;
Waters, Paul D. .
CHROMOSOMA, 2012, 121 (01) :71-78
[2]   Activity map of the tammar X chromosome shows that marsupial X inactivation is incomplete and escape is stochastic [J].
Al Nadaf, Shafagh ;
Waters, Paul D. ;
Koina, Edda ;
Deakin, Janine E. ;
Jordan, Kristen S. ;
Graves, Jennifer A. M. .
GENOME BIOLOGY, 2010, 11 (12)
[3]   Reconstructing an ancestral mammalian immune supercomplex from a marsupial major histocompatibility complex [J].
Belov, K ;
Deakin, JE ;
Papenfuss, AT ;
Baker, ML ;
Melman, SD ;
Siddle, HV ;
Gouin, N ;
Goode, DL ;
Sargeant, TJ ;
Robinson, MD ;
Wakefield, MJ ;
Mahony, S ;
Cross, JGR ;
Benos, PV ;
Samollow, PB ;
Speed, TP ;
Graves, JAM ;
Miller, RD .
PLOS BIOLOGY, 2006, 4 (03) :317-328
[4]   Extreme Telomere Length Dimorphism in the Tasmanian Devil and Related Marsupials Suggests Parental Control of Telomere Length [J].
Bender, Hannah S. ;
Murchison, Elizabeth P. ;
Pickett, Hilda A. ;
Deakin, Janine E. ;
Strong, Margaret A. ;
Conlan, Carly ;
McMillan, Daniel A. ;
Neumann, Axel A. ;
Greider, Carol W. ;
Hannon, Gregory J. ;
Reddel, Roger R. ;
Graves, Jennifer A. Marshall .
PLOS ONE, 2012, 7 (09)
[5]   NOVEL SEX-DIFFERENCES IN LINKAGE VALUES AND MEIOTIC CHROMOSOME BEHAVIOR IN A MARSUPIAL [J].
BENNETT, JH ;
HAYMAN, DL ;
HOPE, RM .
NATURE, 1986, 323 (6083) :59-60
[6]  
Bennett JH, 1990, MAMMALS POUCHES EGGS, P65
[7]   Telomeres and telomerase:: the path from maize, Tetrahymena and yeast to human cancer and aging [J].
Blackburn, Elizabeth H. ;
Greider, Carol W. ;
Szostak, Jack W. .
NATURE MEDICINE, 2006, 12 (10) :1133-1138
[8]   Species-specific shifts in centromere sequence composition are coincident with breakpoint reuse in karyotypically divergent lineages [J].
Bulazel, Kira V. ;
Ferreri, Gianni C. ;
Eldridge, Mark D. B. ;
O'Neill, Rachel J. .
GENOME BIOLOGY, 2007, 8 (08)
[9]  
Carone DM, 2010, MARSUPIAL GENETICS AND GENOMICS, P55, DOI 10.1007/978-90-481-9023-2_3
[10]   X-inactivation profile reveals extensive variability in X-linked gene expression in females [J].
Carrel, L ;
Willard, HF .
NATURE, 2005, 434 (7031) :400-404