Interaction between arginine conformers and Hofmeister halide anions

被引:2
|
作者
Umadevi, P. [1 ]
Senthilkumar, L. [1 ]
机构
[1] Bharathiar Univ, Dept Phys, Coimbatore, Tamil Nadu, India
关键词
Protein aggregation; Hofmeister series; Arginine; Halide anions; Kirkwoods potential; PARTICLE MESH EWALD; PROTEIN AGGREGATION; MOLECULAR-DYNAMICS; NONCOVALENT INTERACTIONS; DENSITY FUNCTIONALS; AQUEOUS SOLUBILITY; ION INTERACTIONS; FORCE-FIELD; AMINO-ACIDS; MECHANISM;
D O I
10.1016/j.comptc.2016.09.015
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this work, we investigated the interaction between halide anions with arginine conformers in an attempt to identify the suitable halide anion to suppress the protein aggregation. The result obtained from structural parameters reveals that the interaction of halide anions results in salting out property of arginine and decreases in the order F- > Cl- > Br-. On a macromolecular perspective, the interaction of halide anions at the amide position leads to interaction of the guanidinium site of the arginine to interact with the hydrophobic core of the protein, which subsequently slows down the protein-protein aggregation. The halide ion size regulates the preferential binding sites in protein and decreases the rate of association by several orders of magnitude i.e. through size of the ion. The radial distribution plot (RDF) plotted between the various pairs, shows that the fluoride anion has more affinity towards the arginine in first hydration shell. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:93 / 103
页数:11
相关论文
共 50 条
  • [2] Interactions between Hofmeister Anions and the Binding Pocket of a Protein
    Fox, Jerome M.
    Kang, Kyungtae
    Sherman, Woody
    Heroux, Annie
    Sastry, G. Madhavi
    Baghbanzadeh, Mostafa
    Lockett, Matthew R.
    Whitesides, George M.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2015, 137 (11) : 3859 - 3866
  • [3] HOFMEISTER EFFECT IN ION-TRANSPORT - REVERSIBLE BINDING OF HALIDE ANIONS TO THE ROFLAMYCOIN CHANNEL
    GRIGORJEV, PA
    BEZRUKOV, SM
    BIOPHYSICAL JOURNAL, 1994, 67 (06) : 2265 - 2271
  • [4] THE POLAROGRAPHIC STUDY ON THE INTERACTION BETWEEN HALIDE ANIONS AND LITHIUM CATION OR ACIDS IN ACETONITRILE
    HOJO, M
    NAGAI, H
    HAGIWARA, M
    IMAI, Y
    CHEMISTRY LETTERS, 1987, (03) : 449 - 452
  • [5] Interaction of surfactants with block-copolymer systems in the presence of Hofmeister anions
    Jadoon, Quratulain
    Bibi, Iram
    Mehmood, Khalid
    Sajjad, Saman
    Nawaz, Mohsan
    Ali, Farman
    Bibi, Saira
    Ur-Rehman, Wajid
    Bano, Shakeela
    Usman, Mohammad
    MATERIALS RESEARCH EXPRESS, 2017, 4 (03):
  • [6] Chemistry of Hofmeister Anions and Osmolytes
    Zhang, Yanjie
    Cremer, Paul S.
    ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 61, 2010, 61 : 63 - 83
  • [7] Density functional theory studies on interaction between calix [4] bipyrrole and halide anions
    Chen, DH
    Chen, PQ
    Sun, HW
    Chen, L
    Shen, RX
    Yuan, J
    Yuan, MX
    Lai, CM
    Li, ZM
    CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE, 2006, 27 (02): : 332 - 335
  • [8] Density functional theory studies on interaction between calix [4] bipyrrole and halide anions
    Department of Chemistry, Nankai University, Tianjin 300071, China
    不详
    不详
    不详
    Kao Teng Hsueh Hsiao Hua Heush Hsueh Pao, 2006, 2 (332-335):
  • [9] Patchy proteins, anions and the Hofmeister series
    Lund, Mikael
    Jungwirth, Pavel
    JOURNAL OF PHYSICS-CONDENSED MATTER, 2008, 20 (49)
  • [10] Reversal of Hofmeister Ordering for Pairing of NH4+ vs Alkylated Ammonium Cations with Halide Anions in Water
    Heyda, Jan
    Lund, Mikael
    Oncak, Milan
    Slavicek, Petr
    Jungwirth, Pavel
    JOURNAL OF PHYSICAL CHEMISTRY B, 2010, 114 (33): : 10843 - 10852